DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vta1 and vta1

DIOPT Version :9

Sequence 1:NP_647640.1 Gene:Vta1 / 38204 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_005160712.1 Gene:vta1 / 406414 ZFINID:ZDB-GENE-040426-2154 Length:303 Species:Danio rerio


Alignment Length:320 Identity:159/320 - (49%)
Similarity:210/320 - (65%) Gaps:30/320 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLKASTQTGEETKLLLGIMDWLEQMKKQYA 71
            ||.||:|||:|:.||||:.||.|:||:.||||:|.|:|..::|.|..|.|:.:||.||.|||:..
Zfish     4 PPQLKAIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLEMMKKELG 68

  Fly    72 ENEAITNEVAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYSSGVLYDILQTFGELSEEALH 136
            :||:|:.|:...|||||||||:|||||.:||.|.|.||::|:||:|.:|:|:|..|||||||.|.
Zfish    69 DNESISQEIVGNAHIENYALKMFLYADNEDRSERFHKNMIKSFYTSSLLFDVLSVFGELSEENLQ 133

  Fly   137 NRKYAKWKAAYIHNCLKNGETPIPGPLPDD----DDEAELEGENANASADTSPEDAAGAAAPAPY 197
            .|||||||||||||||||||||.|||:..:    |||...||...:.:.|..|.     :.|: :
Zfish   134 QRKYAKWKAAYIHNCLKNGETPQPGPIGMEGEAYDDEFGAEGGGPSQAPDNPPH-----SQPS-F 192

  Fly   198 QPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSP----PVDEEKPGGFVPYVPTAQP--NPA 256
            :..|..||  |:|..::..:||.:....|.|.::|.|    ||   ||   || ||...|  :|:
Zfish   193 RGHPSDQP--PTSNFSNIQIPPGSHAPANTPAEIPHPEAAQPV---KP---VP-VPRTMPVVDPS 248

  Fly   257 TAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTAIENLQKALKLLSTGSE 316
            ......:     ..|::||:....||||||||||||.|:||.||::|||||||||:||.|
Zfish   249 LLNNTQE-----GDVRLTPEDFTRAQKYCKYAGSALQYEDVGTAVQNLQKALKLLTTGKE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:398366 75/129 (58%)
Vta1_C 275..311 CDD:407932 25/35 (71%)
vta1XP_005160712.1 Vta1 15..145 CDD:282502 75/129 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594151
Domainoid 1 1.000 192 1.000 Domainoid score I3166
eggNOG 1 0.900 - - E1_KOG0917
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6473
Inparanoid 1 1.050 293 1.000 Inparanoid score I2760
OMA 1 1.010 - - QHG56589
OrthoDB 1 1.010 - - D1450538at2759
OrthoFinder 1 1.000 - - FOG0006035
OrthoInspector 1 1.000 - - oto39757
orthoMCL 1 0.900 - - OOG6_102826
Panther 1 1.100 - - LDO PTHR46009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4945
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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