DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vta1 and Vta1

DIOPT Version :9

Sequence 1:NP_647640.1 Gene:Vta1 / 38204 FlyBaseID:FBgn0035251 Length:316 Species:Drosophila melanogaster
Sequence 2:XP_006227708.1 Gene:Vta1 / 292640 RGDID:1305031 Length:309 Species:Rattus norvegicus


Alignment Length:338 Identity:151/338 - (44%)
Similarity:203/338 - (60%) Gaps:61/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPCPPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLKASTQTGEETKLLLGIMDWLEQMKK 68
            ||.|...|||||.|:.|||||.||.|:||:.||||:|.|:|..::|.|..|.|..:||.||.:||
  Rat     8 PPLPAQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKK 72

  Fly    69 QYAENEAITNEVAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYSSGVLYDILQTFGELSEE 133
            |..:|||:|.|:...||:||||||:|||||.:||...|.||::|:||::.:|.|::..||||::|
  Rat    73 QLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDE 137

  Fly   134 ALHNRKYAKWKAAYIHNCLKNGETPIPGPLP-DDDDEAELEGENANASADTSPEDAAGAAAPAPY 197
            .:.:||||:|||.||||||||||||..||:. ::|::.|   ||.:..|.:.|            
  Rat   138 NVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDVE---ENEDVGATSLP------------ 187

  Fly   198 QPEPDSQPPAPSSPTT-----------SGV-VPPTAEEVLNNPNKL------------PSPPVDE 238
                 :|||.|||.:|           ||: :||.|....|.|.::            |||..  
  Rat   188 -----TQPPQPSSSSTYDPSNLAAGSYSGIQIPPGAHAPANTPAEVPHSTGVTSNAVQPSPQT-- 245

  Fly   239 EKPGGFVPYVPTAQPNPATAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTAIEN 303
                  ||.:|...|:..||:.        ..|::||:....||||||||||||.|:||.||::|
  Rat   246 ------VPAIPAIDPDLYTASQ--------GDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQN 296

  Fly   304 LQKALKLLSTGSE 316
            |||||:||:||.|
  Rat   297 LQKALRLLTTGRE 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vta1NP_647640.1 Vta1 18..148 CDD:398366 68/129 (53%)
Vta1_C 275..311 CDD:407932 24/35 (69%)
Vta1XP_006227708.1 Vta1 22..152 CDD:282502 68/129 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352226
Domainoid 1 1.000 179 1.000 Domainoid score I3448
eggNOG 1 0.900 - - E1_KOG0917
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6473
Inparanoid 1 1.050 274 1.000 Inparanoid score I2906
OMA 1 1.010 - - QHG56589
OrthoDB 1 1.010 - - D1450538at2759
OrthoFinder 1 1.000 - - FOG0006035
OrthoInspector 1 1.000 - - oto96691
orthoMCL 1 0.900 - - OOG6_102826
Panther 1 1.100 - - LDO PTHR46009
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4945
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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