DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13920 and Tmem35b

DIOPT Version :9

Sequence 1:NP_001286902.1 Gene:CG13920 / 38203 FlyBaseID:FBgn0025712 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001258066.1 Gene:Tmem35b / 100361631 RGDID:2319741 Length:152 Species:Rattus norvegicus


Alignment Length:117 Identity:35/117 - (29%)
Similarity:65/117 - (55%) Gaps:3/117 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLKSLSVLLGLFFIFVGTLKLTPHISKDLYKDLRTEYVKYAKVFPLTALFGVKIPSKWYRRTVG 72
            :.|.:|.||||:||...|..||. .:|..:.:.::..:.::|:||||..| |.:.....|:..||
  Rat     3 VSLGALRVLLGIFFTLTGAAKLF-QVSAPVSQQMKALFEQFAEVFPLKVL-GYQPDPISYQAAVG 65

  Fly    73 ILEIVCGLAMALIPYHKVKNTANVTLLVLMLLGIYQHWMVSDPFERSGPALV 124
            .||::.||.:.:.| ..::..:||.|::||:..::...::.:......||:|
  Rat    66 WLELLAGLLLVVGP-PVLQQISNVLLILLMMGAVFTLVVLEESLSTYIPAVV 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13920NP_001286902.1 DoxX_2 13..131 CDD:404454 34/112 (30%)
Tmem35bNP_001258066.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354237
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CJ0A
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

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