DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13920 and Tmem35b

DIOPT Version :9

Sequence 1:NP_001286902.1 Gene:CG13920 / 38203 FlyBaseID:FBgn0025712 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001092789.1 Gene:Tmem35b / 100039968 MGIID:3758095 Length:150 Species:Mus musculus


Alignment Length:112 Identity:36/112 - (32%)
Similarity:63/112 - (56%) Gaps:3/112 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LSVLLGLFFIFVGTLKLTPHISKDLYKDLRTEYVKYAKVFPLTALFGVKIPSKWYRRTVGILEIV 77
            |.||||:||...|..||. .:|..:.:.:|..:.::|:|||| .:||.:.....|:..||.||::
Mouse     8 LRVLLGVFFALTGAAKLF-QVSAPVSQQMRALFEQFAEVFPL-KVFGYQPDPISYQTAVGWLELL 70

  Fly    78 CGLAMALIPYHKVKNTANVTLLVLMLLGIYQHWMVSDPFERSGPALV 124
            .||.:.:.| ..::..:||.|::||:..::...::.:|.....||.|
Mouse    71 AGLLLVVGP-PVLQEISNVLLILLMMGAVFTLVVLKEPLSTYVPAAV 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13920NP_001286902.1 DoxX_2 13..131 CDD:404454 36/112 (32%)
Tmem35bNP_001092789.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850542
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CJ0A
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

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