DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17249 and prcc-1

DIOPT Version :9

Sequence 1:NP_647638.1 Gene:CG17249 / 38201 FlyBaseID:FBgn0035249 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_502515.1 Gene:prcc-1 / 178257 WormBaseID:WBGene00008034 Length:405 Species:Caenorhabditis elegans


Alignment Length:515 Identity:126/515 - (24%)
Similarity:192/515 - (37%) Gaps:153/515 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLVAYAAS---SDEDSENEEENSVPQVEVIKPQAKPSTPSEAYL--ARESTSGHISDEDDDYVP 60
            |.||.||.|   |||:.|.:::||      :.||.:.....||:.  ..:|:|.:::.||     
 Worm     1 MGLVDYAGSESESDEEMETQQKNS------LAPQNQQLVDDEAFFDNTEKSSSPNMNKED----- 54

  Fly    61 QEVSLQEL-KPPNGRLLLALPKPKVTAPAKDLENEDVDNQVTSAFANLPMPRTAAKGKAIVEEKD 124
               .|:|| ||....:.||                        ..|...:.:.|.|.....|.|.
 Worm    55 ---VLEELVKPKEWEVKLA------------------------EKARRKLEKKALKKAQKEERKK 92

  Fly   125 DEFLHKKALPVE--------IEKPPPPPVKGKVKIS-------IPSLRDFSDVDQEKADRAKNKV 174
            ::.|.|||:.||        |:|     .||||.||       |.......|.|.|.|..|..| 
 Worm    93 EKKLAKKAMKVEKIPKIGGGIQK-----AKGKVIISAFGALAGITGENSSDDSDNEGAAVATVK- 151

  Fly   175 DKPNVPK-GSGLLSLLPQAKSERNFSKNSSSAVAYPSASTTLASSLSNNPAQPRAAPAFVPDTVK 238
                 || |:..||.||..|...|.|          ..:.....|:..:....:|.||       
 Worm   152 -----PKLGNSFLSNLPAPKGRDNRS----------DGANVFDKSMVPHSVSKKATPA------- 194

  Fly   239 QRRAAHNTEGVDGPKAGHKKNPETKDALKSTKSKPISKPTSLVNASDSEDDDEDGTGDFFSLNS- 302
                                            :.|:.||.......|..|||:||..|||..:| 
 Worm   195 --------------------------------AAPVFKPAPAPKLPDDSDDDDDGPTDFFGFSSA 227

  Fly   303 ----EQKLPEVSSNEISALVAKRAAKMVEAS-------SKYLEEVAEKEAAEAEAARLQEEQSQI 356
                |.::|    :||..:....:..:|..|       .:.:.|:.|:|      ..:||..|  
 Worm   228 PTRKESEIP----SEIPYMTMNSSMDVVGPSRPDEGMDPRQMYEMPEEE------EDVQEGPS-- 280

  Fly   357 AQKRYHEQQLNAEAMDALVGKNA----KRRRKEAKEM--QVIDISGSQVL-PDREEWMRSALASS 414
            |...:..:::|.|....|:.:.:    :..|:...||  .::|::....| ||.:..:...|...
 Worm   281 ASNAWLHRKINDEQAHKLLMRFSHDIGQEERRSINEMANSIVDVNVDDALGPDVKTNIIKNLGHR 345

  Fly   415 TTFQPTGVLTDEEPVAG--TRRKHQITYLAHKAKANEAELQAMWSANRQTRRATQSKYGF 472
            ...:.|.....:....|  :||||||||||..|.:.|.:|:..|:..:|::|..:.||||
 Worm   346 AFVEATSAPLPQVQTQGQMSRRKHQITYLASLAVSREEQLKDQWADQKQSKRMARQKYGF 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17249NP_647638.1 PRCC <371..472 CDD:287255 29/109 (27%)
prcc-1NP_502515.1 PRCC <306..405 CDD:370923 28/98 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167385
Domainoid 1 1.000 63 1.000 Domainoid score I6785
eggNOG 1 0.900 - - E1_KOG3903
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I3844
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007347
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13621
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3708
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.970

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