DRSC/TRiP Functional Genomics Resources

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Protein Alignment ARF6 and arf6

DIOPT Version :10

Sequence 1:NP_001654.1 Gene:ARF6 / 382 HGNCID:659 Length:175 Species:Homo sapiens
Sequence 2:NP_596822.1 Gene:arf6 / 2539937 PomBaseID:SPBC1539.08 Length:184 Species:Schizosaccharomyces pombe


Alignment Length:172 Identity:129/172 - (75%)
Similarity:148/172 - (86%) Gaps:0/172 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 67
            |..|::|.|||||||||||||||||||||||||.|||.||||||||||||||||:||||||||||
pombe    11 KPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQ 75

Human    68 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKP 132
            ||||||||||:|||:|||||||.||.:||.||||||||||:||||||.::|:.|||||||.|:.|
pombe    76 DKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSP 140

Human   133 HEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
            .:|.:.|.|.:::||.|.|||:||.:||||.|||.||:.|.|
pombe   141 AQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQNAK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARF6NP_001654.1 ARF 1..175 CDD:128474 129/172 (75%)
arf6NP_596822.1 Arf6 13..180 CDD:206716 126/166 (76%)

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