DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bgb and cbfb

DIOPT Version :9

Sequence 1:NP_001261271.1 Gene:Bgb / 38198 FlyBaseID:FBgn0013753 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_009291805.1 Gene:cbfb / 30744 ZFINID:ZDB-GENE-980526-440 Length:201 Species:Danio rerio


Alignment Length:167 Identity:90/167 - (53%)
Similarity:122/167 - (73%) Gaps:13/167 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MPRVVPDQKSKFESDELFRRLSRESEVRYTGYRERSIEERQVRFMNGCREGHTEASFVASGTNLQ 94
            ||||||||:||||::|.||:||||.|::|||:|:|..||||.||.|.||:|.:|.:|||:||||.
Zfish     1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLS 65

  Fly    95 L-VFNANQNPYLHDKE--------CDFDKEHGKVHIKSYFIMNGVCVRFRGWIDLERLDGVGCLE 150
            | .|.||    ||..:        .||::|.|||::|:..|:|||||.:|||:||.||||:||||
Zfish    66 LQFFPAN----LHGDQRQAPTREYVDFERETGKVYLKAPMILNGVCVIWRGWLDLHRLDGMGCLE 126

  Fly   151 YDERRAMHEDAILRDQIDRYNQRLREFEDTKRAYRDN 187
            ||:.||.||||:.:...:...:|.|:|||..|::|::
Zfish   127 YDDERAQHEDALAQAAFEEARRRTRDFEDRDRSHRED 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BgbNP_001261271.1 CBF_beta 30..189 CDD:280473 90/167 (54%)
cbfbXP_009291805.1 CBF_beta 1..162 CDD:280473 89/164 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586538
Domainoid 1 1.000 187 1.000 Domainoid score I3269
eggNOG 1 0.900 - - E1_KOG4785
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11173
Inparanoid 1 1.050 187 1.000 Inparanoid score I3910
OMA 1 1.010 - - QHG49951
OrthoDB 1 1.010 - - D1254153at2759
OrthoFinder 1 1.000 - - FOG0005775
OrthoInspector 1 1.000 - - otm25838
orthoMCL 1 0.900 - - OOG6_108102
Panther 1 1.100 - - LDO PTHR10276
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4481
SonicParanoid 1 1.000 - - X5552
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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