Protein Alignment nSyb and SNC1

DIOPT Version :10

• Sequence 1: NP_001261269.1
• Gene: nSyb / 38196
• FlyBaseID: FBgn0013342
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_009372.1
• Gene: SNC1 / 851203
• SGDID: S000000028
• Length: 117
• Species: Saccharomyces cerevisiae
• Alignment Length: 91
• Identity: 29/91 - (31%)
• Similarity: 59/91 - (64%)
• Gaps: 0/91 - (0%)

  Fly    33 PQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRK 97
            ||.:.::.|..:.||::|:.|.|||.|:.||.||..:|:.::|:||.|...|..|::.|.::::.
Yeast    20 PQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFKRGANRVRKA 84

  Fly    98 FWLQNLKMMIIMGVIGLVVVGIIAKP 123
            .|.::|||.:.:.::.::::.:|..|
Yeast    85 MWYKDLKMKMCLALVIIILLVVIIVP 110

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nSyb	NP_001261269.1	R-SNARE_VAMP2	40..102	CDD:277223	22/61 (36%)
SNC1	NP_009372.1	SNC1	<1..117	CDD:227472	29/91 (32%)