DRSC/TRiP Functional Genomics Resources

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Protein Alignment nSyb and ATYKT62

DIOPT Version :9

Sequence 1:NP_001261269.1 Gene:nSyb / 38196 FlyBaseID:FBgn0013342 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001318826.1 Gene:ATYKT62 / 835930 AraportID:AT5G58180 Length:199 Species:Arabidopsis thaliana


Alignment Length:57 Identity:17/57 - (29%)
Similarity:29/57 - (50%) Gaps:0/57 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 AAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGK 93
            |...:|.:.|.::||...|:...::.||.|..||..|.:::..|...:..|.:||.|
plant   135 AEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSELSLASKMFYKQAKK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nSybNP_001261269.1 Synaptobrevin 39..120 CDD:279324 16/55 (29%)
R-SNARE_VAMP2 40..102 CDD:277223 16/54 (30%)
ATYKT62NP_001318826.1 SNC1 1..196 CDD:227472 17/57 (30%)
R-SNARE_YKT6 137..197 CDD:277220 16/55 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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