Protein Alignment nSyb and VAMP728

DIOPT Version :10

• Sequence 1: NP_001261269.1
• Gene: nSyb / 38196
• FlyBaseID: FBgn0013342
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_001189966.1
• Gene: VAMP728 / 822087
• AraportID: AT3G24890
• Length: 124
• Species: Arabidopsis thaliana
• Alignment Length: 94
• Identity: 25/94 - (26%)
• Similarity: 45/94 - (47%)
• Gaps: 26/94 - (27%)

  Fly    32 NPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDD--------------RADALQQ 82
            :|::|:   :|.:.:|.|.::..:|..|:||.|:|..|:..|.|              :.|.:..
plant    25 HPEEIS---KLAKVKALVTKMKGVMMENIEKALDRSEKIKILVDLRSKYSNLPFPSYGQEDIITP 86

  Fly    83 GASQFEQQAGKLKRKFWLQNLKM-MIIMG 110
            |.        |:.||.|.||:|. :|::|
plant    87 GT--------KITRKMWFQNMKFKLIVLG 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nSyb	NP_001261269.1	R-SNARE_VAMP2	40..102	CDD:277223	18/75 (24%)
VAMP728	NP_001189966.1	Synaptobrevin	28..107	CDD:395764	23/89 (26%)