Protein Alignment nSyb and vamp1a

DIOPT Version :9

• Sequence 1: NP_001261269.1
• Gene: nSyb / 38196
• FlyBaseID: FBgn0013342
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_998563.1
• Gene: vamp1a / 406707
• ZFINID: ZDB-GENE-040426-2725
• Length: 119
• Species: Danio rerio
• Alignment Length: 117
• Identity: 75/117 - (64%)
• Similarity: 89/117 - (76%)
• Gaps: 7/117 - (5%)

  Fly     4 AAPAGDAPPNA-GAPAGEGGDGEIVGGPHNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERD 67
            :||...|.|.| |||.|||      |.|..|..:.:.:|||||||||||||||||.||:||||||
Zfish     2 SAPDAAASPGAPGAPEGEG------GAPAQPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERD 60

  Fly    68 SKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVVVGI 119
            .|||||||||||||.||||||..|.|||.|:|.:|:|||||||::|::::||
Zfish    61 QKLSELDDRADALQAGASQFESSAAKLKNKYWWKNMKMMIIMGIMGIILLGI 112

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nSyb	NP_001261269.1	Synaptobrevin	39..120	CDD:279324	61/81 (75%)
		R-SNARE_VAMP2	40..102	CDD:277223	50/61 (82%)
vamp1a	NP_998563.1	Synaptobrevin	31..>97	CDD:279324	51/65 (78%)
		R-SNARE_VAMP2	33..95	CDD:277223	50/61 (82%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170589082
Domainoid	1	1.000	128	1.000	Domainoid score	I5254
eggNOG	1	0.900	-	-		E1_COG5143
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	146	1.000	Inparanoid score	I4391
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000385
OrthoInspector	1	1.000	-	-		otm26350
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45701
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X424
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	11	10.850