Protein Alignment nSyb and Vamp3

DIOPT Version :9

• Sequence 1: NP_001261269.1
• Gene: nSyb / 38196
• FlyBaseID: FBgn0013342
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_476438.1
• Gene: Vamp3 / 29528
• RGDID: 61880
• Length: 103
• Species: Rattus norvegicus
• Alignment Length: 108
• Identity: 62/108 - (57%)
• Similarity: 72/108 - (66%)
• Gaps: 13/108 - (12%)

  Fly    13 NAGAPAGEGGDGEIVGGPHNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDDRA 77
            :.|.|:|...            ...:.:||||||.||||||||||.||:||||||.|||||||||
  Rat     2 STGVPSGSSA------------ATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRA 54

  Fly    78 DALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVVVGII 120
            ||||.||||||..|.|||||:|.:|.||..| |:..||::.||
  Rat    55 DALQAGASQFETSAAKLKRKYWWKNCKMWAI-GISVLVIIVII 96

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nSyb	NP_001261269.1	Synaptobrevin	39..120	CDD:279324	57/80 (71%)
		R-SNARE_VAMP2	40..102	CDD:277223	50/61 (82%)
Vamp3	NP_476438.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..25		9/34 (26%)
		R-SNARE_VAMP2	17..79	CDD:277223	50/61 (82%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5143
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000385
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_103752
Panther	1	1.100	-	-	LDO	PTHR45701
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X424
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.770