Protein Alignment nSyb and snb-2

DIOPT Version :9

• Sequence 1: NP_001261269.1
• Gene: nSyb / 38196
• FlyBaseID: FBgn0013342
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_506093.2
• Gene: snb-2 / 179692
• WormBaseID: WBGene00004898
• Length: 114
• Species: Caenorhabditis elegans
• Alignment Length: 102
• Identity: 52/102 - (50%)
• Similarity: 73/102 - (71%)
• Gaps: 8/102 - (7%)

  Fly    20 EGGDGEI--VGGPHNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLERDSKLSELDDRADALQQ 82
            |.|:||.  ..|.:|      .||:|..||||:||:|:||.||.||:|||.:|:.||.||:.||.
 Worm    12 EAGNGEAQPPTGTYN------TKRMQMAQAQVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQN 70

  Fly    83 GASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVVVGI 119
            |||||:|.:..|::|:|.||::||||:|:|..:|:||
 Worm    71 GASQFQQSSRTLRQKYWWQNIRMMIIIGLIAFLVIGI 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nSyb	NP_001261269.1	Synaptobrevin	39..120	CDD:279324	46/81 (57%)
		R-SNARE_VAMP2	40..102	CDD:277223	35/61 (57%)
snb-2	NP_506093.2	R-SNARE_VAMP2	28..90	CDD:277223	35/61 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5143
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000385
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45701
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910