DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GC and LOC1276973

DIOPT Version :10

Sequence 1:NP_523885.2 Gene:GC / 38194 FlyBaseID:FBgn0035245 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_316389.4 Gene:LOC1276973 / 1276973 VectorBaseID:AGAMI1_001858 Length:688 Species:Anopheles gambiae


Alignment Length:645 Identity:347/645 - (53%)
Similarity:438/645 - (67%) Gaps:24/645 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NAFFRDCLGHDLSNFTSLTNFTS-WLNRPVDGAALGIFRLLYGAAMLIDIAEERGGGQLDVRFQE 111
            |:|.|:..|||:..|.|...|.. .:.||||||||.:.|.|:|.||||||.||||||.||:|:.|
Mosquito    39 NSFLRNTTGHDVRCFASFDAFVQRCMYRPVDGAALAVGRALFGLAMLIDIPEERGGGDLDLRWGE 103

  Fly   112 PLHCHFPLFNGMRALDYPLMGCVYLCMWLGAWGIMLGYRFRTSCLAFLIPYWYIFLLDKPTWNNH 176
            |..|.|||.:.|..|..|.||.:|..||.||.|||||||||.|...|...|||:|||||..||||
Mosquito   104 PRDCRFPLIHSMEPLPLPRMGIIYGLMWSGAAGIMLGYRFRLSAALFAATYWYVFLLDKSAWNNH 168

  Fly   177 SYLFGLVGTLLLFTQAESYCSLDRWLNPRKSHCIPYWNYFLIKFQFFILYMYAGLKKFSLEWLSG 241
            |||:||:||:.|||.|....|:|.|.:|.....:|:||||::|||||:||..|||||...|||||
Mosquito   169 SYLYGLLGTIFLFTDAHRCWSIDAWRDPPPDQTVPFWNYFILKFQFFVLYFVAGLKKLCREWLSG 233

  Fly   242 YAMSNLSYHWVFAPFRQVIDPELIDLLIVHWFTAFFDVSIAFFMTLEKTRLLVTPFMLSFHLMNS 306
            |||:||||||||.|||.|:..:|.||||||||...||.::.||:....||.|.|.|..:||||||
Mosquito   234 YAMTNLSYHWVFFPFRAVLGAKLTDLLIVHWFGCLFDTTVVFFLIYGTTRRLATLFASAFHLMNS 298

  Fly   307 RLFVIGMFPWVCLAEVPLFFSFDWPRRL---G------NWSKIQDVHPKDPE-EELSKPGILARL 361
            |||.|||||||||:::||::||.|||:|   |      |...||:......| :|.:|.....|.
Mosquito   299 RLFYIGMFPWVCLSQLPLYYSFSWPRKLLPRGVSKTVLNNEHIQEGDDCSQEVKESNKSSHNRRR 363

  Fly   362 RTG---LILAYCGLQLFLPYSHFITKGYNNWTNGLYGYSWDMMVHSYDTLQTSIQVVDNES-RQV 422
            |..   .:||||.||||||||||:|:|||||||||||||||||||::||:...|:|||.|: .:|
Mosquito   364 RKWSMCAMLAYCLLQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHAWDTIMIGIRVVDRENPDRV 428

  Fly   423 HNLNPYAFTEYDRWTKYADMAVQYARCIEENLQEKQPHIGR-NISIYFDIWCSMNGRFQQRSFDP 486
            |.:.|:|||:.|||||:||||||:|.|||.|:|.:.|...| |:|||||||||||||||||.|||
Mosquito   429 HYVEPFAFTDNDRWTKHADMAVQFAGCIERNIQREAPAALRPNVSIYFDIWCSMNGRFQQRIFDP 493

  Fly   487 REDLLRAKWSPFESTSWSLPLLNELNHMRPKL-RTIETEVLAWNNYSDVIFVADFPGLTLTNFIS 550
            ..|:|:|.|||.|...|.||||::.:.:|..| |....|||.|:|:|.|:|:||||||||.|::.
Mosquito   494 NVDILKAPWSPIEPVQWVLPLLHQFSGLRDTLIRRKTDEVLGWSNHSGVLFIADFPGLTLRNYVG 558

  Fly   551 PDLINCTLTILEGNVRYRNERD------PEAYFLTAGKSIGLESNITHLVTTIGQKPASYLFTYT 609
            .||.|.:||:|:|.|||....|      |.| .|..|:|..|.:.|.|.|.|||.:|:.|::||.
Mosquito   559 EDLYNVSLTVLQGTVRYAASSDEVGTKRPSA-ILQTGQSTSLPAGIFHAVETIGPEPSCYMYTYV 622

  Fly   610 NKTMLEQGITIEQPDTEERSVLPLWQEFQHRVTNYQQFLGHIGNCLMYLLYDVPIPQAVK 669
            |:|...:.....:...::.::|||.:||.||:.|:.:|..|:||.|:|.||.||:|:.:|
Mosquito   623 NRTKELEATRNGEEVKQQPAMLPLGEEFLHRLENFLRFGQHVGNSLLYELYGVPMPRRLK 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCNP_523885.2 VKG_Carbox 83..506 CDD:461546 257/437 (59%)
LOC1276973XP_316389.4 VKG_Carbox 75..513 CDD:461546 257/437 (59%)

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