DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and ABCB25

DIOPT Version :9

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_200635.1 Gene:ABCB25 / 835939 AraportID:AT5G58270 Length:728 Species:Arabidopsis thaliana


Alignment Length:615 Identity:344/615 - (55%)
Similarity:439/615 - (71%) Gaps:24/615 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EVTSKD---------MLRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVD--- 184
            :.||.|         :||.:..|:|.:::|..|.||..:||.|.|:|:|.|.||||||.|||   
plant   108 KTTSSDSDSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLA 172

  Fly   185 -------TMTTLNMDTAPD--AVLSAATALMLGYGIARASAAGFNELRNAVFAKVAHHSIRKIAS 240
                   ::||. ..|.|.  .|.:...|:::||||||..::.|||||.|||:|||..:||.::.
plant   173 SATGTGASLTTF-AATNPTLLTVFATPAAVLIGYGIARTGSSAFNELRTAVFSKVALRTIRSVSR 236

  Fly   241 NVFLHLHNLDLAFHLNKQTGALSKTIDRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLA 305
            .||.|||:|||.:||:::||.|::.||||||.|||:|||||||:||||.|:::||.||..|.|.|
plant   237 KVFSHLHDLDLRYHLSRETGGLNRIIDRGSRAINFILSAMVFNVVPTILEISMVSGILAYKFGAA 301

  Fly   306 FAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYN 370
            ||.::...||.|..:||:||||||:||..||:|:|:|..:|:|||||||||||||||.|||..|:
plant   302 FAWITSLSVGSYIVFTLAVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEGYEAEKYD 366

  Fly   371 EVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSI 435
            :.|||||.|:|:|..|||.|||||:.|||:|||..|||.::.|..|.||||||||||.||||||:
plant   367 QFLKKYEDAALQTQRSLAFLNFGQSIIFSTALSTAMVLCSQGIMNGQMTVGDLVMVNGLLFQLSL 431

  Fly   436 PLGFLGSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPI 500
            ||.||||||||..|:|:||::||.|:...|.|...::|:||.:...|  |||.||.|.|.|.:.|
plant   432 PLNFLGSVYRETIQSLVDMKSMFQLLEEKSDITNTSDAKPLVLKGGN--IEFENVHFSYLPERKI 494

  Fly   501 FRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVP 565
            ...:||.:||||:|||||.||||||:::|:|||||:.:||.:.|.||||..|.|:|||..|.|||
plant   495 LDGISFVVPAGKSVAIVGTSGSGKSTILRMLFRFFDTDSGNIRIDGQDIKEVRLDSLRSSIGVVP 559

  Fly   566 QDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRV 630
            ||:|||::||.||||||.||.:..||..|||.|.:|::|.::|.:|||.||||||||||||||||
plant   560 QDTVLFNDTIFHNIHYGRLSATEEEVYEAARRAAIHETISNFPDKYSTIVGERGLKLSGGEKQRV 624

  Fly   631 AIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENG 695
            |:||..||:..||:.|||||:|||.||..||.||....|.||||.|||||:|....|||:|||||
plant   625 ALARTFLKSPAILLCDEATSALDSTTEAEILNALKALASNRTSIFIAHRLTTAMQCDEIVVLENG 689

  Fly   696 RVGERGTHSELLRQNGLYARLWETQTQQFD 725
            :|.|:|.|.|||.::|.||:||..|....|
plant   690 KVVEQGPHDELLGKSGRYAQLWTQQNSSVD 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 163/284 (57%)
ATM1 222..717 CDD:227590 298/494 (60%)
P-loop_NTPase 485..720 CDD:304359 143/234 (61%)
ABCB25NP_200635.1 ATM1 218..713 CDD:227590 300/496 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 314 1.000 Domainoid score I304
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3175
Inparanoid 1 1.050 641 1.000 Inparanoid score I182
OMA 1 1.010 - - QHG53794
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 1 1.000 - - FOG0003749
OrthoInspector 1 1.000 - - otm2672
orthoMCL 1 0.900 - - OOG6_101840
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2158
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.