DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and ABCB25

DIOPT Version :10

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_200635.1 Gene:ABCB25 / 835939 AraportID:AT5G58270 Length:728 Species:Arabidopsis thaliana


Alignment Length:615 Identity:344/615 - (55%)
Similarity:439/615 - (71%) Gaps:24/615 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EVTSKD---------MLRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVD--- 184
            :.||.|         :||.:..|:|.:::|..|.||..:||.|.|:|:|.|.||||||.|||   
plant   108 KTTSSDSDSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLA 172

  Fly   185 -------TMTTLNMDTAPD--AVLSAATALMLGYGIARASAAGFNELRNAVFAKVAHHSIRKIAS 240
                   ::||. ..|.|.  .|.:...|:::||||||..::.|||||.|||:|||..:||.::.
plant   173 SATGTGASLTTF-AATNPTLLTVFATPAAVLIGYGIARTGSSAFNELRTAVFSKVALRTIRSVSR 236

  Fly   241 NVFLHLHNLDLAFHLNKQTGALSKTIDRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLA 305
            .||.|||:|||.:||:::||.|::.||||||.|||:|||||||:||||.|:::||.||..|.|.|
plant   237 KVFSHLHDLDLRYHLSRETGGLNRIIDRGSRAINFILSAMVFNVVPTILEISMVSGILAYKFGAA 301

  Fly   306 FAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYN 370
            ||.::...||.|..:||:||||||:||..||:|:|:|..:|:|||||||||||||||.|||..|:
plant   302 FAWITSLSVGSYIVFTLAVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEGYEAEKYD 366

  Fly   371 EVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSI 435
            :.|||||.|:|:|..|||.|||||:.|||:|||..|||.::.|..|.||||||||||.||||||:
plant   367 QFLKKYEDAALQTQRSLAFLNFGQSIIFSTALSTAMVLCSQGIMNGQMTVGDLVMVNGLLFQLSL 431

  Fly   436 PLGFLGSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPI 500
            ||.||||||||..|:|:||::||.|:...|.|...::|:||.:...|  |||.||.|.|.|.:.|
plant   432 PLNFLGSVYRETIQSLVDMKSMFQLLEEKSDITNTSDAKPLVLKGGN--IEFENVHFSYLPERKI 494

  Fly   501 FRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVP 565
            ...:||.:||||:|||||.||||||:::|:|||||:.:||.:.|.||||..|.|:|||..|.|||
plant   495 LDGISFVVPAGKSVAIVGTSGSGKSTILRMLFRFFDTDSGNIRIDGQDIKEVRLDSLRSSIGVVP 559

  Fly   566 QDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRV 630
            ||:|||::||.||||||.||.:..||..|||.|.:|::|.::|.:|||.||||||||||||||||
plant   560 QDTVLFNDTIFHNIHYGRLSATEEEVYEAARRAAIHETISNFPDKYSTIVGERGLKLSGGEKQRV 624

  Fly   631 AIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENG 695
            |:||..||:..||:.|||||:|||.||..||.||....|.||||.|||||:|....|||:|||||
plant   625 ALARTFLKSPAILLCDEATSALDSTTEAEILNALKALASNRTSIFIAHRLTTAMQCDEIVVLENG 689

  Fly   696 RVGERGTHSELLRQNGLYARLWETQTQQFD 725
            :|.|:|.|.|||.::|.||:||..|....|
plant   690 KVVEQGPHDELLGKSGRYAQLWTQQNSSVD 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ATM1 147..732 CDD:444078 338/591 (57%)
ABCB25NP_200635.1 ATM1 111..714 CDD:444078 341/605 (56%)

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