DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and abcb6

DIOPT Version :9

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_001072643.1 Gene:abcb6 / 780100 XenbaseID:XB-GENE-1001119 Length:849 Species:Xenopus tropicalis


Alignment Length:602 Identity:254/602 - (42%)
Similarity:374/602 - (62%) Gaps:10/602 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KDMLRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMT---TLNMDTAPDA 197
            |..|..:|.||||:.:..::..|.:.:||:...:.:.|.||...|..||.:|   |.|: .|...
 Frog   234 KKKLLLVMQYIWPRRNIPLQLLVALCMGLMGLERAINVFVPIYAKKIVDGLTEDSTWNI-LAVTV 297

  Fly   198 VLSAATALMLGYGIARASAAGF-NELRNAVFAKVAHHSIRKIASNVFLHLHNLDLAFHLNKQTGA 261
            .:......:.|.|   |...|| :.||..::.:|...:.|::...:|.|||:|.|.:||.::||.
 Frog   298 CIYVLLKFLQGGG---AGTTGFLSNLRTFMWIRVQQFTNREVQIRLFAHLHSLSLRWHLGRKTGE 359

  Fly   262 LSKTIDRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQ 326
            :.:::|||:..||.:||.:||:|:|||.::.:............|..:...|:.:|...|:.:|:
 Frog   360 VLRSVDRGTSSINSLLSYIVFSILPTIADIVIGIVYFTSSFNAWFGLIIFVCMTLYLTLTIIITE 424

  Fly   327 WRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLN 391
            |||::|..||..:|||.::|||||:|:|||||:|.|.||.|.:|:.:.||:.:..|.::|||:||
 Frog   425 WRTKYRREMNTRDNEAKSRAVDSLLNFETVKYYNAEGYEVGRFNDSIMKYQVSEWKVNASLAMLN 489

  Fly   392 FGQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSIPLGFLGSVYREVRQALLDMRA 456
            ..||.|....|....:|.|..:.:....|||.|:....:.||..||.:.|:.||.::.:.:||..
 Frog   490 QTQNLIIGLGLLAGSLLCAYFVTENKFKVGDYVLFGTYIIQLYTPLNWFGTYYRMIQSSFIDMEN 554

  Fly   457 MFTLMNVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPIFRDLSFTIPAGKNVAIVGGSG 521
            ||.|.|.|..::.|.||..|..  .:..|||.||.|.|..||.|.||:|||:..|:::|:||.||
 Frog   555 MFELFNEDQEVKDAVNAPALMF--RSGKIEFENVHFSYLDGKEILRDISFTVMPGQSIALVGPSG 617

  Fly   522 SGKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHYGNLSK 586
            ||||:::||||||::...|.:.:.|||||.|..||||..|.|||||:|||::||.:||.||.:|.
 Frog   618 SGKSTIIRLLFRFYDVKGGTIKVDGQDISTVRQESLRSHIGVVPQDTVLFNDTIRNNIRYGRVSA 682

  Fly   587 SHAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSS 651
            :..||:.||..||:|:.|:|:...|.||.|||||||||||||||||||.|||...|::.|||||:
 Frog   683 TDDEVEEAAAAADIHERILSFRDGYDTQTGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSA 747

  Fly   652 LDSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNGLYARL 716
            ||:.||.||..:|.:..:.||:|.:|||||||.::|:||||:.|::.|||.|.|||.:.|:||.:
 Frog   748 LDTETERNIQASLAKVCANRTTIVVAHRLSTVINSDQILVLKEGQIVERGRHEELLLKGGVYAGM 812

  Fly   717 WETQTQQFDPSREINEE 733
            |:.|....:.|.:.:.|
 Frog   813 WQKQQSGSESSSDSDSE 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 94/276 (34%)
ATM1 222..717 CDD:227590 225/494 (46%)
P-loop_NTPase 485..720 CDD:304359 132/234 (56%)
abcb6NP_001072643.1 Required for ATPase activity. /evidence=ECO:0000250|UniProtKB:Q9NP58 1..227
Required for the lysosomal targeting. /evidence=ECO:0000250|UniProtKB:Q9NP58 1..195
MTABC_N 6..246 CDD:318426 5/11 (45%)
ATM1 320..815 CDD:227590 226/496 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 814..849 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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