DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and abcb7

DIOPT Version :10

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_001410903.2 Gene:abcb7 / 566515 ZFINID:ZDB-GENE-050517-10 Length:743 Species:Danio rerio


Alignment Length:746 Identity:397/746 - (53%)
Similarity:505/746 - (67%) Gaps:58/746 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KCYTLAKGPGTHVQARVLYSSLTK--------VDDKNSSDAKRKKITPFTPTPGSKLLGGVFGKK 79
            ||       |.|:|.|.|...|.:        ..|..:::.::::.|.....|            
Zfish     9 KC-------GFHMQRRKLSLLLQRSSAVQAWTFHDHRAANKRKERNTYLLSDP------------ 54

  Fly    80 AKGGAPAAAAAKTTTLQRQRPYRPQQQQSRLCHVHI-------GGGSDGGSGLGKLDAPEVTSKD 137
                     :.:::|....|....||....:.|:|:       |....|.|...|....||.|..
Zfish    55 ---------SRESSTWANNRGQNSQQILEAVKHLHLQERQCWHGNAGGGLSADPKNVLKEVNSSK 110

  Fly   138 MLRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMT-----TLNMDTAPDA 197
            :|.||..|:|||:.|.:|.||.|||.||||:|:..|.|||:||.|||::.     .||:..||:.
Zfish   111 ILGAMFTYVWPKDRPDLRARVVISLSLLAGAKITNVIVPFMFKYAVDSLNQMSGHMLNLSDAPNT 175

  Fly   198 VLSAATALMLGYGIARASAAGFNELRNAVFAKVAHHSIRKIASNVFLHLHNLDLAFHLNKQTGAL 262
            |::.|||:::|||::|..:|.|||||||||.|||..|||:||.|||||||||||.|||::|||||
Zfish   176 VVTMATAVLIGYGVSRTGSALFNELRNAVFGKVAQSSIRRIAKNVFLHLHNLDLGFHLSRQTGAL 240

  Fly   263 SKTIDRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQW 327
            ||.||||:|||:|||||:|||:.||:||:.|||.||..|||..||.|::|.:..|.|:|::||||
Zfish   241 SKAIDRGTRGISFVLSALVFNLGPTLFEMMLVSGILYYKCGGHFALVTLGTLSAYTAFTVAVTQW 305

  Fly   328 RTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLNF 392
            |||||:.||:|:|||||.|:|||:|||||||||||||||..|:..||.||::||||:|:||:|||
Zfish   306 RTQFRIEMNKADNEAGNAAIDSLLNYETVKYFNNEKYEAERYDGFLKVYESSSLKTTSTLAMLNF 370

  Fly   393 GQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSIPLGFLGSVYREVRQALLDMRAM 457
            ||:||||..|:.|||||:|.|..|.||||||||||.||||||:||.|||:||||.||||:||..:
Zfish   371 GQSAIFSVGLTAIMVLASKGIMSGTMTVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTL 435

  Fly   458 FTLMNVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPIFRDLSFTIPAGKNVAIVGGSGS 522
            |||::||:.|:....|.||.|....::|.|.:|.|||..|:.:...:||.:||||.|||||||||
Zfish   436 FTLLSVDTKIKEKEMAPPLIVTPQEATIRFEDVYFEYLEGQKVLNGVSFEVPAGKKVAIVGGSGS 500

  Fly   523 GKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHYGNLSKS 587
            |||::|||||||:||..|.:.|.||:|..|.||||||.:.|||||:|||||||.:|:.|||::.:
Zfish   501 GKSTIVRLLFRFYEPQQGNIYIAGQNIRDVGLESLRKAVGVVPQDAVLFHNTIFYNLMYGNINAT 565

  Fly   588 HAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSL 652
            ..:|...||:|.:||:|:..|.:|.|||||||||||||||||||||||||||.|||::|||||||
Zfish   566 AEDVYRVARLAGIHDAILKMPHKYDTQVGERGLKLSGGEKQRVAIARAILKNPPILLYDEATSSL 630

  Fly   653 DSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNG-LYARL 716
            ||:||.|||.::......|||:.|||||||:.|||||:||..|:|.|||.|..||...| |||.|
Zfish   631 DSVTEENILTSMKEMVKDRTSVFIAHRLSTIVDADEIIVLNQGKVAERGNHQTLLDTPGSLYANL 695

  Fly   717 WETQTQQF---------DPSREINEEVAAKK 738
            |.||..:.         .|.|...:|...||
Zfish   696 WNTQNSRILSNGSKPEPVPERVSQKEEERKK 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ATM1 147..732 CDD:444078 366/599 (61%)
abcb7NP_001410903.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..64 3/39 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 703..724 3/20 (15%)

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