DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and abcb6a

DIOPT Version :9

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:XP_005160347.1 Gene:abcb6a / 564067 ZFINID:ZDB-GENE-050517-9 Length:851 Species:Danio rerio


Alignment Length:629 Identity:262/629 - (41%)
Similarity:380/629 - (60%) Gaps:19/629 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GGSGLGKLDAPEVTSKDM---LRAMMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGA 182
            |...||..|..:.|.||.   :|.::.|:|||...|::..|.:.||:|...:.:.|.||..:|..
Zfish   217 GAPLLGNSDEDQSTWKDFGKKVRLLVPYMWPKGSVLLQLLVLMCLGMLGIERAINVFVPIYYKNI 281

  Fly   183 VDTMT------TLNMDTAPDAVLSAATALMLGYGIARASAAGF-NELRNAVFAKVAHHSIRKIAS 240
            |:.:|      ||.|......:|.    .:.|.|   |.|:|| :.||:.::.:|..::.|.:..
Zfish   282 VNQLTDGSSWKTLAMTVCVYCLLK----FLQGGG---AGASGFVSNLRSFLWIRVQQYTNRVVQV 339

  Fly   241 NVFLHLHNLDLAFHLNKQTGALSKTIDRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLA 305
            .:|.|||.|.|.:||.::||.:.::||||:..||.:||.:||:|.|||.::.:............
Zfish   340 RLFAHLHALSLRWHLGRRTGDVLRSIDRGTSSINSLLSYIVFSIFPTIADIVIAIVYFISNFNAW 404

  Fly   306 FAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYN 370
            |..:...|:.:|...|:.:|:|||::|..||..:|.|.:||||||:|:|||||:|.|.||.|.:.
Zfish   405 FGLIVFVCMALYLTLTIFITEWRTKYRRDMNTQDNNAKSKAVDSLLNFETVKYYNAESYEVGRFE 469

  Fly   371 EVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSI 435
            :.:.||:.:..||::||||||..||.|....|....:|.|..:.:|...|||.|:....:.||..
Zfish   470 DAILKYQVSEWKTNASLALLNQTQNLIIGLGLLTGSLLCAYFVTEGKFQVGDYVLFGTYIIQLYT 534

  Fly   436 PLGFLGSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPI 500
            ||.:.|:.||.::.:.:||.:||.|...:..::...||..|:.  ....:||.||.|.|..||.|
Zfish   535 PLNWFGTYYRMIQNSFIDMESMFKLFTEEEEVKDEVNAGNLYF--RQGKVEFENVFFSYTQGKEI 597

  Fly   501 FRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVP 565
            .:|:|||:..|:.||:||.||||||:::||||||::...|.:.|.|||||.|...|||..|.|||
Zfish   598 LKDVSFTVLPGQTVALVGQSGSGKSTIIRLLFRFYDVQGGCIKIDGQDISKVKQSSLRAHIGVVP 662

  Fly   566 QDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRV 630
            ||:|||::.|..||.||.::.:..||:.||..||:||.|:.:|..|.||||||||||||||||||
Zfish   663 QDTVLFNDNIRDNIRYGRVTATDQEVEEAAIAADIHDKIIGFPDGYETQVGERGLKLSGGEKQRV 727

  Fly   631 AIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENG 695
            ||||.|||...|::.|||||:||:.||.||..:|.:..:.||::.:||||||:..||.||||.:|
Zfish   728 AIARTILKAPQIILLDEATSALDTQTERNIQASLAKVCANRTTVVVAHRLSTIIGADVILVLRDG 792

  Fly   696 RVGERGTHSELLRQNGLYARLWETQTQQFDPSREINEEVAAKKT 739
            ::.|||.|.|||.:.|||:.:|:.|.|..|.....:.|...:|:
Zfish   793 QIVERGRHEELLAKGGLYSDMWQKQQQAQDSDSASDSETKDRKS 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 98/279 (35%)
ATM1 222..717 CDD:227590 223/494 (45%)
P-loop_NTPase 485..720 CDD:304359 130/234 (56%)
abcb6aXP_005160347.1 MTABC_N 6..247 CDD:292803 9/29 (31%)
ABC_membrane 269..536 CDD:279056 97/273 (36%)
ATM1 321..816 CDD:227590 224/496 (45%)
ABCC_ATM1_transporter 582..817 CDD:213220 130/234 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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