DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and CG1824

DIOPT Version :9

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster


Alignment Length:715 Identity:200/715 - (27%)
Similarity:316/715 - (44%) Gaps:128/715 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 QRPYRPQQQQSRL---CHVHIGGGSDGGSGLG-----------------------KLDAPEVTSK 136
            |.|..|....|||   ..:.:.||.....|||                       |.:..|.|:.
  Fly    49 QPPAIPPTNASRLLQTTRLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTAS 113

  Fly   137 ----DMLRAMMAYIWPKEDPLVRKRVG-ISLGLLAGSKLLTVCVPFLFKGAVDT---------MT 187
                |..|     :|...:|.:.:.:| :...|:..  .:.:.:|.|....|:|         |.
  Fly   114 EQHFDWKR-----LWTYLEPHLWELIGAVCAALIVA--YINIRIPNLLGDLVNTLARYANTYVMD 171

  Fly   188 TLNMDTAPDAVLSAATALMLGYGIARASAAGFNELRNAVFAKVAHHSIRKIASNVFLHLHNLDLA 252
            .:|.....|....|:..|.| |.:    .:||..:...:.::|......|:..::|..:...|:|
  Fly   172 PINNSFVKDVSKPASNLLSL-YML----QSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIA 231

  Fly   253 FHLNKQTGAL---------------SKTIDRGSRGINFVL--SAMVFNIVPTIFELALVSSILGV 300
            |....:||.|               .:.:.:|.|....::  |..:|.|.|.:..:||       
  Fly   232 FFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIAL------- 289

  Fly   301 KCGLAFAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENEAGNKAVDSLINYETVKYFNNEKYE 365
                    .|:.||.::..|.  ..:.|:..:....|||...| ...::|.|..||:       .
  Fly   290 --------ASVPCVVMFMTYL--GKKLRSLSKSSQAQAERATG-VCEEALSNIRTVR-------S 336

  Fly   366 AGCYNEVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALL 430
            :.|....::.:||.:.:.:.....|.:| .|||....:..:         ..:.:..|.|...|:
  Fly   337 SACEYREMQLFEAETNEAARLAQKLGYG-IAIFQGLTNFFL---------NTLVLSTLFMGGHLM 391

  Fly   431 FQLSIPLGFL-------GSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQP---------LFVD 479
            ...|:..|.|       ..|.|.:.|..:.:..|...|:..|.:....:.||         :..:
  Fly   392 STESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQE 456

  Fly   480 TTNSSIEFRNVSFEY--EPGKPIFRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKV 542
            ..:..|.|.||||.|  :|...:.:|.|.|:..|:.||:||.||||||::..|:.||:||::|.:
  Fly   457 RLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNI 521

  Fly   543 LIGGQDISAVDLESLR-KVIAVVPQDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMS 606
            .:.|..:|.:....|| .|:..:.|..|||..:|..||.||.......:|..|||::..||.:.:
  Fly   522 KLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTA 586

  Fly   607 WPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGR 671
            .|..|:|.|||||.:||||::||:|||||:|||..|||.|||||:||:.:|..:.:||......|
  Fly   587 LPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNR 651

  Fly   672 TSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNGLYARLWETQTQQFDPSREINEEVAA 736
            |::.|||||||:::||.|:||:.|||.|.|.|.||:.:.|||..|...|.:     |:|.|:|.|
  Fly   652 TTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQER-----RDIQEQVQA 711

  Fly   737  736
              Fly   712  711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 56/298 (19%)
ATM1 222..717 CDD:227590 160/530 (30%)
P-loop_NTPase 485..720 CDD:304359 109/237 (46%)
CG1824NP_572810.1 MdlB 119..701 CDD:224055 179/628 (29%)
ABC_membrane 137..415 CDD:279056 60/319 (19%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 109/237 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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