DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCB7 and abtm-1

DIOPT Version :9

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_001021830.1 Gene:abtm-1 / 171807 WormBaseID:WBGene00022281 Length:704 Species:Caenorhabditis elegans


Alignment Length:644 Identity:347/644 - (53%)
Similarity:460/644 - (71%) Gaps:28/644 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SRLCHVHIGGGSD---GGSGLGKLDAPEVTSKDMLRAMMAYIWPKEDPLVRKRVGISLGLLAGSK 169
            :|.| .|.|..|.   ..||       :::...:::.::.::|||:.|.:::||.::|.||..:|
 Worm    55 TRTC-FHPGASSQVPLQASG-------QLSGYQLVQRLLKFVWPKDKPEIKRRVLVALCLLIAAK 111

  Fly   170 LLTVCVPFL-------FKGAVDTMTTLNMDTAP-DAVLSAATALMLGYGIARASAAGFNELRNAV 226
            |..|.||||       :.|.......|..|..| ..:.:|..|..:.||||||:|:.||||||||
 Worm   112 LANVSVPFLLRDIVNYYNGKAPEFLKLTFDGTPSQTIFTAGIATCIAYGIARATASLFNELRNAV 176

  Fly   227 FAKVAHHSIRKIASNVFLHLHNLDLAFHLNKQTGALSKTIDRGSRGINFVLSAMVFNIVPTIFEL 291
            |||||.:|||.|:.::|||||:|||:||||:|||||||.||||:||::||||:::||::||..|:
 Worm   177 FAKVAQNSIRSISRSIFLHLHSLDLSFHLNRQTGALSKAIDRGTRGMSFVLSSLIFNLIPTAVEI 241

  Fly   292 ALVSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENEAGNKAVDSLINYETV 356
            .:||::.....|..||.::||.:|:|...||.||:|||:||..||||:|:|||||:|||||||||
 Worm   242 GMVSALFTGTLGPEFAYMTMGSIGMYGIATLGVTKWRTKFRHQMNQADNDAGNKAIDSLINYETV 306

  Fly   357 KYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQGNMTVG 421
            |||||||:||..|:..|||||.|||||:||||||||.||||||.||..:|.:|...||.|::|:|
 Worm   307 KYFNNEKFEADRYDHFLKKYEGASLKTTSSLALLNFTQNAIFSGALIGVMCMAGTRIAAGDLTIG 371

  Fly   422 DLVMVNALLFQLSIPLGFLGSVYREVRQALLDMRAMFTLMNVDSSIQTAANAQPLFVDTTNSSIE 486
            ||::.|.|||||||||.|||||||||||.|:||..||:|:.:...|..||:|:.|.:...:.|::
 Worm   372 DLILANTLLFQLSIPLNFLGSVYREVRQGLVDMNQMFSLLTLKPKIVEAADAKRLEIVDNDISLK 436

  Fly   487 FRNVSFEYEPGKPIFRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFRFFEPNSGKVLIGGQDISA 551
            |.||.|.|.|.|||.:.|...||.||.||||||||||||::||||:|.::..||.|.|.|.:...
 Worm   437 FENVHFGYLPEKPILKGLDLEIPVGKKVAIVGGSGSGKSTIVRLLYRLYDTESGNVRINGLETRD 501

  Fly   552 VDLESLRKVIAVVPQDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMSWPGQYSTQVG 616
            :.|:|||:.|::|||||||||:||.:|:.||..|.|..||..||::||||:|:::.|..|.|.||
 Worm   502 LTLDSLRQSISIVPQDSVLFHDTIFYNLAYGRPSASMEEVYQAAKLADLHESVLAMPNGYETLVG 566

  Fly   617 ERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSITEHNILQALTRATSGRTSICIAHRLS 681
            |||||||||||||||||||||||.|.:|:||||||||:|||.||::||..|...|||:.|||||:
 Worm   567 ERGLKLSGGEKQRVAIARAILKNAPFVIYDEATSSLDAITESNIMKALKGAVEKRTSLFIAHRLA 631

  Fly   682 TVKDADEILVLENGRVGERGTHSELLRQNGLYARLWETQTQQFDPSREINEEVAAKKTR 740
            |:.|||.|.||::|:|.|:|:|.:||..:||||:||::|.         ...||.||::
 Worm   632 TIVDADIIYVLQDGKVAEKGSHFDLLAVDGLYAQLWKSQN---------IHGVAPKKSK 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 163/280 (58%)
ATM1 222..717 CDD:227590 301/494 (61%)
P-loop_NTPase 485..720 CDD:304359 140/234 (60%)
abtm-1NP_001021830.1 ABC_membrane 104..387 CDD:294371 164/282 (58%)
ATM1 172..667 CDD:227590 301/494 (61%)
P-loop_NTPase 437..670 CDD:304359 140/232 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157573
Domainoid 1 1.000 320 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3175
Inparanoid 1 1.050 656 1.000 Inparanoid score I410
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53794
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 1 1.000 - - FOG0003749
OrthoInspector 1 1.000 - - oto20193
orthoMCL 1 0.900 - - OOG6_101840
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2158
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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