DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCB7 and abcb6b

DIOPT Version :9

Sequence 1:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster
Sequence 2:XP_021334538.1 Gene:abcb6b / 100004801 ZFINID:ZDB-GENE-070912-584 Length:683 Species:Danio rerio


Alignment Length:597 Identity:247/597 - (41%)
Similarity:368/597 - (61%) Gaps:14/597 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 MMAYIWPKEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPDAVLSAATALM 206
            ::.|:||:....::..|.:.:|||...:::.|.||...:..|:.::.  |:......::....::
Zfish    90 LVPYMWPRGSVWLQVLVILCVGLLGLERVINVFVPIYSRNIVNQLSA--MENWRTLAITVCVYVL 152

  Fly   207 L----GYGIARASAAGF-NELRNAVFAKVAHHSIRKIASNVFLHLHNLDLAFHLNKQTGALSKTI 266
            |    |.|:   ..:|| :.||:.::..|..::.|.:...:|.|||.|.|.:||.::||.:.::|
Zfish   153 LKFFQGGGV---GTSGFVSNLRSFLWTHVQQYTSRVVQVRLFAHLHGLSLRWHLGRRTGDVLRSI 214

  Fly   267 DRGSRGINFVLSAMVFNIVPTIFELALVSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQWRTQF 331
            |||:..:|.:||.:||:|||||.::.:............|..:...|:.:|...|:.:|:|||::
Zfish   215 DRGTSSVNNLLSYIVFSIVPTIADIVIAIIYFVTYFSAWFGLIVFICMFLYLTLTIIITEWRTKY 279

  Fly   332 RVFMNQAENEAGNKAVDSLINYETVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLNFGQNA 396
            |..||..:|.|.:||||||:|:|||||:|:|.:|...:.:.:.||:|...||::||||||..||.
Zfish   280 RREMNTQDNNAKSKAVDSLLNFETVKYYNSEGFEVRRFEDAILKYQACEWKTNASLALLNQTQNL 344

  Fly   397 IFSSALSLIMVLAAKEIAQGNMTVGDLVMVNALLFQLSIPLGFLGSVYREVRQALLDMRAMFTLM 461
            |....|....:|.|..:......|||.|:....:.||..||.:.|:.||.::.|.:||.:||.|:
Zfish   345 IIGLGLLAGSLLCAYYVTVDKFQVGDYVLFGTYIVQLYTPLNWFGTYYRMIQSAFVDMESMFDLL 409

  Fly   462 NVDSSIQTAANAQPLFVDTTNSSIEFRNVSFEYEPGKPIFRDLSFTIPAGKNVAIVGGSGSGKSS 526
            ..:..::...||..|  ..|...::|:||.|.|..||.|..|:|||:..|:..|:||.||||||:
Zfish   410 TEEKEVKDTVNAGDL--SFTKGRVDFKNVCFSYTAGKEILSDVSFTVMPGQTFALVGPSGSGKST 472

  Fly   527 MVRLLFRFFEPNSGKVLIGGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHYGNLSKSHAEV 591
            ::||||||::..||.:||.||||:.|...|||..|.|||||:|||::.|..||.||.:|.|..||
Zfish   473 IIRLLFRFYDVQSGCILIDGQDIAKVRQNSLRSYIGVVPQDTVLFNDNIRENIRYGRISASDQEV 537

  Fly   592 QNAARMADLHDSIMSWPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSIT 656
            :.||..||:||.|:|.|..|.|:||||||||||||||||||||.|||:..|::.|||||:|||.|
Zfish   538 EEAAVAADIHDKILSLPDGYDTEVGERGLKLSGGEKQRVAIARTILKSPRIILLDEATSALDSQT 602

  Fly   657 EHNILQALTRATSGRTSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNGLYARLWETQT 721
            |.||..:|.:..:..|::.:||||||:..:|:||||.:||:.|:|.|.|||.:.||||.:|..|.
Zfish   603 ERNIQASLAKVCANHTTLVVAHRLSTIVSSDQILVLHDGRIAEQGRHEELLAKGGLYAAMWLKQQ 667

  Fly   722 QQFDPSREINEE 733
            |  .|..|::.|
Zfish   668 Q--TPESEVSTE 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 91/277 (33%)
ATM1 222..717 CDD:227590 224/494 (45%)
P-loop_NTPase 485..720 CDD:304359 131/234 (56%)
abcb6bXP_021334538.1 MTABC_N <64..96 CDD:318426 1/5 (20%)
ATM1 170..665 CDD:227590 225/496 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248727at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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