DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12104 and TOX4

DIOPT Version :9

Sequence 1:NP_001261267.1 Gene:CG12104 / 38187 FlyBaseID:FBgn0035238 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_055643.1 Gene:TOX4 / 9878 HGNCID:20161 Length:621 Species:Homo sapiens


Alignment Length:591 Identity:115/591 - (19%)
Similarity:156/591 - (26%) Gaps:347/591 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FHTPSFGDEVFE-----------------------LTDTPAESQSPSQASR-------------- 31
            |||||.|||.||                       |.| |:.||..|.:::              
Human    27 FHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLAD-PSSSQDGSFSAQYGVQTLDMPVGMTH 90

  Fly    32 -------------RMLSLDQSM------------------------------LNDDDEENCDTYA 53
                         ..:.||.|:                              ..|..|.:.....
Human    91 GLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGL 155

  Fly    54 SGGGQNLL---VQPEQQ-------------------------QNQAMAQA--------------- 75
            |.||..:|   ..||.:                         |...:.:|               
Human   156 SLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDP 220

  Fly    76 --PPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVR 138
              |.||::.:|||||||..|||.|||..:..::..||.:||:||.|.||.||..:.|..|:||::
Human   221 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLK 285

  Fly   139 LMRGYRHQLSESEGTSEA----EAPPAVATNQPPPLVT--------------------------- 172
            .:..|:.. .|.:.|.|.    .|||: .|..|||:.|                           
Human   286 ALAAYKDN-QECQATVETVELDPAPPS-QTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLS 348

  Fly   173 -----------------TKL--------------------------------------------- 175
                             |||                                             
Human   349 SYVANQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPS 413

  Fly   176 --------------------------------------------ESVEDLQQ------------- 183
                                                        :.|..|||             
Human   414 QQAQIVTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQ 478

  Fly   184 --SVDAQQEPPPDQIQLL---------------------------TEAARVQ------------- 206
              .::.||:|||.||:.:                           .||..|:             
Human   479 KVRINLQQQPPPLQIKSVPLPTLKMQTTLVPPTVESSPERPMNNSPEAHTVEAPSPETICEMITD 543

  Fly   207 ---------------------------KCTREQCNKPAIINPDWEDEYCSNECVVIHCRNVFNHW 244
                                       :|.|..|..|.|::.||::|||||||||.|||:||..|
Human   544 VVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKDWDNEYCSNECVVKHCRDVFLAW 608

  Fly   245 VISMNS 250
            |.|.||
Human   609 VASRNS 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12104NP_001261267.1 HMG-box 76..140 CDD:238037 31/63 (49%)
TOX4NP_055643.1 NHP6B 140..>306 CDD:227935 45/166 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..227 10/73 (14%)
Nuclear localization signal. /evidence=ECO:0000255 213..218 0/4 (0%)
HMG-box 223..288 CDD:238037 31/64 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..333 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 510..529 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 73 1.000 Domainoid score I9245
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000742
OrthoInspector 1 1.000 - - otm40922
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4401
SonicParanoid 1 1.000 - - X923
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
66.030

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