Protein Alignment CG12104 and Hmgb4

DIOPT Version :9

• Sequence 1: NP_001261267.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_001102933.1
• Gene: Hmgb4 / 685271
• RGDID: 1596426
• Length: 181
• Species: Rattus norvegicus
• Alignment Length: 86
• Identity: 23/86 - (26%)
• Similarity: 39/86 - (45%)
• Gaps: 4/86 - (4%)

  Fly    75 APPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRL 139
            ||.||.:.|.||..|....:||:||..::.|:......||..:.:..|..|..:....:.:|.:.
  Rat    92 APRKPPSSFLLFSLDHFAKLKQENPNWTVVQVAKAAGKMWSMITDVDKRPYEQKAAIMRAKYFQE 156

  Fly   140 MRGYRHQLSES----EGTSEA 156
            ...|..|...|    :|:|::
  Rat   157 REAYLSQCQNSKINLQGSSKS 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	17/63 (27%)
Hmgb4	NP_001102933.1	HMGB-UBF_HMG-box	9..75	CDD:238686
		HMG-box	93..158	CDD:238037	17/64 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900