Protein Alignment CG12104 and Hmg20a

DIOPT Version :9

• Sequence 1: NP_001261267.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_080088.1
• Gene: Hmg20a / 66867
• MGIID: 1914117
• Length: 346
• Species: Mus musculus
• Alignment Length: 213
• Identity: 40/213 - (18%)
• Similarity: 68/213 - (31%)
• Gaps: 45/213 - (21%)

  Fly     7 PSFGDE----------VFELT--DTPAESQSPSQASRRML-SLDQSMLNDDDEENCDTYASGGGQ 58
            |.|.||          ...||  :.|..|.:.|..:...: .|.|..|...:..|.   ..|..|
Mouse    12 PLFADEDGSKESNDLATSGLTHPEGPYGSAATSTTNPEFVEDLSQGQLLQSEASNA---VEGNEQ 73

  Fly    59 NLLVQPEQQQNQAM---------------AQAPPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQV 108
                :||.:|....               :.||..||..:..|..:....::.:.|.....::..
Mouse    74 ----RPEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITR 134

  Fly   109 IVQTMWESLDETQKNVYALRHEQEKREYVRLMRGY----------RHQLSESEGTSEAEAPPAVA 163
            ::...|..|...:|..|....:::|..|::.:..|          |......:|.|..:.....|
Mouse   135 MLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSHRQDAARQA 199

  Fly   164 TNQPPPLVTTKLESVEDL 181
            |:........|..||.|:
Mouse   200 THDHEKETEVKERSVFDI 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	11/63 (17%)
Hmg20a	NP_080088.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..112		22/106 (21%)
		DUF5401	<76..312	CDD:375164	24/142 (17%)
		HMGB-UBF_HMG-box	102..167	CDD:238686	11/64 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..210		5/31 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900