DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12104 and tox

DIOPT Version :9

Sequence 1:NP_001261267.1 Gene:CG12104 / 38187 FlyBaseID:FBgn0035238 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001243623.1 Gene:tox / 569666 ZFINID:ZDB-GENE-070912-181 Length:540 Species:Danio rerio


Alignment Length:195 Identity:54/195 - (27%)
Similarity:92/195 - (47%) Gaps:29/195 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TPAESQS--PSQASRRMLSLDQSMLNDDDEENCDTYASGGGQ-----NLLVQPE--QQQNQAMAQ 74
            :|.||:|  ||.:         |.:::||.:  |.....|.:     ::..:|:  :::.:....
Zfish   234 SPPESKSATPSPS---------SSVHEDDAD--DAAKINGAEKRAATDMAKKPKTPKKKKKKDPN 287

  Fly    75 APPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRL 139
            .|.||::.:|||||||..|||.|||..:..::..||.:||:.|.|.||.||..:.|..|:||::.
Zfish   288 EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTETAKKEYLKQ 352

  Fly   140 MRGYRHQLSESEGTSEAEAPPAVATNQ---PPPLVTTKLESVEDLQQSVDAQQEP------PPDQ 195
            :..||..|.........:...:.|:..   .||:.:...::...|..:....|:|      ||.|
Zfish   353 LAAYRASLVSQSYNDPGDVKASQASQMLGPKPPVFSGAGQTHPGLYMAPPYHQQPGLSSHLPPMQ 417

  Fly   196  195
            Zfish   418  417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12104NP_001261267.1 HMG-box 76..140 CDD:238037 30/63 (48%)
toxNP_001243623.1 HMG-box 289..>338 CDD:238037 24/48 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9262
eggNOG 1 0.900 - - E1_COG5648
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000742
OrthoInspector 1 1.000 - - otm25163
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X923
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.860

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