Protein Alignment CG12104 and hmgb3a

DIOPT Version :9

• Sequence 1: NP_001261267.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_001116308.1
• Gene: hmgb3a / 561025
• ZFINID: ZDB-GENE-050428-1
• Length: 213
• Species: Danio rerio
• Alignment Length: 180
• Identity: 36/180 - (20%)
• Similarity: 75/180 - (41%)
• Gaps: 23/180 - (12%)

  Fly    16 LTDTPAESQSPSQASRRMLSLDQSMLNDDDEENCDTYASGGGQNLLVQPEQQQNQAMAQAPPKPL 80
            :|| ..:|:....|.:..:..||.|::                   ..|.::..:....||.:|.
Zfish    52 MTD-KEKSRFEDMAKQDKVRYDQEMMH-------------------YMPGKRGKKKDPNAPKRPP 96

  Fly    81 APFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRLMRGYRH 145
            :.|.||..:....||.|.|:..:..:...:..||..|.:..|..:.::..:.|.:|.:.:..|:.
Zfish    97 SGFFLFCSEHRPQIKAQYPSLGIGDVAKKLGEMWNGLTDANKQPFLMKANKLKDKYQKDVADYKT 161

  Fly   146 QLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDAQQEPPPDQ 195
            : |::.|.|.....|......|.|::.:.::..||.::  |.::|...|:
Zfish   162 K-SKAGGVSMGMGMPMANCMPPKPMMKSNMDDEEDDEE--DEEEEEDDDE 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	15/63 (24%)
hmgb3a	NP_001116308.1	HMG_box_2	7..78	CDD:286146	7/45 (16%)
		HMG_box	92..159	CDD:278906	15/66 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900