Protein Alignment CG12104 and RGD1559962

DIOPT Version :9

• Sequence 1: NP_001261267.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: XP_008756867.1
• Gene: RGD1559962 / 498988
• RGDID: 1559962
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 127
• Identity: 30/127 - (23%)
• Similarity: 51/127 - (40%)
• Gaps: 17/127 - (13%)

  Fly    75 APPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRL 139
            ||.:|.:.|.||..:....||.::|..|:......:..||.......|..|..:..:.|.||.:.
  Rat    94 APKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEEYEKD 158

  Fly   140 MRGYRHQLSESEGTSE-AEAPPAVAT-----NQPPPLVTTKLESVEDLQQSVDAQQEPPPDQ 195
            :..||     ::|.|| .:..|...|     |:|..      |..|:.:...|.::|...::
  Rat   159 IAAYR-----AKGKSEVGKKGPGRPTGSKKKNEPED------EEEEEEEDDEDEEEEDEDEE 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	16/63 (25%)
RGD1559962	XP_008756867.1	HMG-box	7..78	CDD:294061
		HMG_box	95..162	CDD:278906	16/66 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900