Protein Alignment CG12104 and HmgD

DIOPT Version :10

• Sequence 1: NP_647629.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Alignment Length: 119
• Identity: 23/119 - (19%)
• Similarity: 50/119 - (42%)
• Gaps: 7/119 - (5%)

  Fly    72 MAQAPPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREY 136
            |:..|.:||:.:.|:......:||::||...:.::......:|.::.:  |:.:..:..:.|.:|
  Fly     1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDY 63

  Fly   137 VRLMRGYRHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDAQQE 190
            .|.::.:     |:.|.|.|...........|.....|....|:..:..|.:.|
  Fly    64 DRAVKEF-----EANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 112

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_647629.1	HMG-box_SF	78..144	CDD:469606	12/65 (18%)
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	12/70 (17%)