Protein Alignment CG12104 and Hmg-2

DIOPT Version :10

• Sequence 1: NP_647629.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Alignment Length: 210
• Identity: 50/210 - (23%)
• Similarity: 82/210 - (39%)
• Gaps: 31/210 - (14%)

  Fly    19 TP-AESQSPSQASRRMLSLDQSMLNDDDEENCDTYASGG---------------GQNLLVQPEQQ 67
            || |..:||........|:|.:.:.|.||   |..|.|.               |..|....:::
  Fly     8 TPDAVPESPVSLPIASQSMDTATIEDFDE---DKPAKGKKKAKNPKGRHSDSDIGSELKKLAQRR 69

  Fly    68 QNQAMAQAPPKPLAPFALFFRDTVTAIKQQNP-TCSLEQMQVIVQTMWESLDETQKNVYALRHEQ 131
            .|  :|.||..||..:..|..|....::::.| ..:||..::|.:. |..|.|.:|..|.....:
  Fly    70 IN--VAGAPKMPLNGYVRFMNDRREELRREQPQRTALEHTRIIGEE-WHQLPEERKLPYIEAAAK 131

  Fly   132 EKREYVRLMRGYRHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDA----QQEPP 192
            :|..|...::.:..:..|......|:|..|...:..|...|.|.||.....:...|    :|...
  Fly   132 DKAIYQEQLQMFLKEHPEIVANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSED 196

  Fly   193 PDQIQLLTEAARVQK 207
            ||.:.|    |:|::
  Fly   197 PDDVPL----AKVKR 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_647629.1	HMG-box_SF	78..144	CDD:469606	15/66 (23%)
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	18/79 (23%)