Sequence 1: | NP_001261267.1 | Gene: | CG12104 / 38187 | FlyBaseID: | FBgn0035238 | Length: | 250 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006241006.1 | Gene: | Hmg20b / 362825 | RGDID: | 1309235 | Length: | 344 | Species: | Rattus norvegicus |
Alignment Length: | 255 | Identity: | 46/255 - (18%) |
---|---|---|---|
Similarity: | 87/255 - (34%) | Gaps: | 62/255 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 HTPSFGDEVFELTDTPAESQSPSQASRRMLSLDQSMLNDDDEENCDTYASGGGQNLLVQP----- 64
Fly 65 ---EQQQNQAMAQAPPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYA 126
Fly 127 LRHEQEKREYVRLMRGYRHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDAQQEP 191
Fly 192 PPDQIQLLTEAARVQKCTRE-QCNKPAIINPDWEDEYCSNECVVIHCRNVFNHWVISMNS 250 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12104 | NP_001261267.1 | HMG-box | 76..140 | CDD:238037 | 13/63 (21%) |
Hmg20b | XP_006241006.1 | NHP6B | 26..229 | CDD:227935 | 38/215 (18%) |
HMGB-UBF_HMG-box | 96..160 | CDD:238686 | 13/63 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5648 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |