Protein Alignment CG12104 and Hmg20a

DIOPT Version :9

• Sequence 1: NP_001261267.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: XP_006243179.1
• Gene: Hmg20a / 315689
• RGDID: 1564760
• Length: 350
• Species: Rattus norvegicus
• Alignment Length: 171
• Identity: 32/171 - (18%)
• Similarity: 56/171 - (32%)
• Gaps: 32/171 - (18%)

  Fly    36 LDQSMLNDDDEENCDTYASGGGQNLLVQPEQQQNQAM---------------AQAPPKPLAPFAL 85
            |.|..|...:..|.   |.|..|    :||.:|....               :.||..||..:..
  Rat    58 LSQGQLLQSESSNA---AEGSEQ----RPEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVR 115

  Fly    86 FFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRLMRGY------- 143
            |..:....::.:.|.....::..::...|..|...:|..|....:::|..|::.:..|
  Rat   116 FMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYK 180

  Fly   144 ---RHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDL 181
               |......:|.|..:.....||:........|..||.|:
  Rat   181 VFSRKTQDRQKGKSHRQDAARQATHDHEKETEVKERSVFDI 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_001261267.1	HMG-box	76..140	CDD:238037	11/63 (17%)
Hmg20a	XP_006243179.1	HMGB-UBF_HMG-box	106..171	CDD:238686	11/64 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900