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Protein Alignment CG12104 and HMGB3
DIOPT Version :9
Sequence 1: | NP_001261267.1 |
Gene: | CG12104 / 38187 |
FlyBaseID: | FBgn0035238 |
Length: | 250 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001288160.1 |
Gene: | HMGB3 / 3149 |
HGNCID: | 5004 |
Length: | 220 |
Species: | Homo sapiens |
Alignment Length: | 152 |
Identity: | 35/152 - (23%) |
Similarity: | 68/152 - (44%) |
Gaps: | 24/152 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 DEENCDTYASGGGQNLLVQPEQQQNQAMAQAPPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVI 109
|.|..|...:.||:. ::..| ||.:|.:.|.||..:....||..||..|:..:...
Human 92 DREMKDYGPAKGGKK-----KKDPN-----APKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKK 146
Fly 110 VQTMWESLDETQKNVYALRHEQEKREYVRLMRGYRHQLSESEGTSE-AEAPPAVATNQPPPLVTT 173
:..||.:|::::|..|..:..:.|.:|.:.:..|: |:|..: |:.|..||..
Human 147 LGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYK-----SKGKFDGAKGPAKVARK-------- 198
Fly 174 KLESVEDLQQSVDAQQEPPPDQ 195
|:|..::.::..:.::|...|:
Human 199 KVEEEDEEEEEEEEEEEEEEDE 220
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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