Protein Alignment CG12104 and penr-1

DIOPT Version :10

• Sequence 1: NP_647629.1
• Gene: CG12104 / 38187
• FlyBaseID: FBgn0035238
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_504410.1
• Gene: penr-1 / 178915
• WormBaseID: WBGene00015075
• Length: 317
• Species: Caenorhabditis elegans
• Alignment Length: 259
• Identity: 49/259 - (18%)
• Similarity: 103/259 - (39%)
• Gaps: 84/259 - (32%)

  Fly    20 PAESQSPSQASRRMLSLDQSMLNDDDEENCDTYASGGGQNLLVQPEQQQNQAMAQA--PPKPLAP 82
            ||...|.|:.             :|.||...|:         .:.|:.:|:...||  .|..:.|
 Worm    35 PAADSSDSEP-------------EDFEEEQITH---------TEAEETRNEDNGQAIYEPDVMRP 77

  Fly    83 FALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQK--NVYALRHEQEKREYVRLMRGYRH 145
            ....|.:.:  :::|:.|.::..|:..| ..|.   ||::  |:.|.....:.|:|::....:::
 Worm    78 LIESFLEFL--VQRQSETSTVHNMENKV-AEWA---ETRRDDNIDAGLFVLDFRKYLKSAVKFKN 136

  Fly   146 -QLSES-----------EGTSEAEAPPAVATNQPPPLVTTKL----------------ESVEDLQ 182
             |:::|           :...|.::.|    ::||    ||:                |.:::..
 Worm   137 LQMNDSCAAISTYLNSEKSLVEYKSMP----DRPP----TKIQLYIKKHQIMLKGIGGEPMKNAY 193

  Fly   183 QSVDAQQEPPPDQIQLLTEAA-----RVQK-------CTREQ----CNKPAIINPDWEDEYCSN 230
            ::::|..|...:..:||.||:     ::|:       .|.||    .||..::|..:..:..|:
 Worm   194 KAMNADTEGAKELDELLREASLQYIPQLQEFLDTHPNLTEEQKRSIVNKMKMLNKKYNSKEISS 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12104	NP_647629.1	HMG-box_SF	78..144	CDD:469606	13/67 (19%)
penr-1	NP_504410.1	None