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Protein Alignment CG12104 and LOC108350839
DIOPT Version :9
Sequence 1: | NP_001261267.1 |
Gene: | CG12104 / 38187 |
FlyBaseID: | FBgn0035238 |
Length: | 250 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017448593.1 |
Gene: | LOC108350839 / 108350839 |
RGDID: | 11440908 |
Length: | 214 |
Species: | Rattus norvegicus |
Alignment Length: | 113 |
Identity: | 23/113 - (20%) |
Similarity: | 47/113 - (41%) |
Gaps: | 10/113 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 KPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRLMRG 142
:|.:.|.||..:....||.::|..|:..:...:..||.:.....|.....:..:.|.:|.:.:..
Rat 97 RPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAVDDKQPCEKKAAKLKEKYEKDIAA 161
Fly 143 YRHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDAQQE 190
|| ::|..:|.....|...: :.|.:..||.::..|.::|
Rat 162 YR-----AKGKPDAAKKGVVKAEK-----SKKKKEEEDDEEDEDEEEE 199
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG12104 | NP_001261267.1 |
HMG-box |
76..140 |
CDD:238037 |
13/61 (21%) |
LOC108350839 | XP_017448593.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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