DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13917 and Prr36

DIOPT Version :10

Sequence 1:NP_647628.1 Gene:CG13917 / 38186 FlyBaseID:FBgn0035237 Length:2019 Species:Drosophila melanogaster
Sequence 2:NP_001418795.1 Gene:Prr36 / 501795 RGDID:1566084 Length:1079 Species:Rattus norvegicus


Alignment Length:415 Identity:104/415 - (25%)
Similarity:161/415 - (38%) Gaps:111/415 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1558 LKSNSRAYVPHRASSQVATERNSLNLHRRTQSEAPPVTHKKPITVAASTV-ESKSAQGK------ 1615
            :||.:   ||...:|:..   ..||....:.|..||    .|:|.||..| |:..|.|:      
  Rat     7 IKSGA---VPRMPASRTP---GLLNPRPPSGSARPP----PPVTSAALRVLEANGAMGRRPLVER 61

  Fly  1616 -PNAAAAKLGEVRPRYLEPRKPRAMAPSATNGHGAGPVRSATSSSIPANGGRKAPAKNLHISSSD 1679
             |.|..|.|         |:..:|..|.:| .||| |.|||.|       |.::||         
  Rat    62 APGACKATL---------PQTSKAALPQST-VHGA-PARSAGS-------GPRSPA--------- 99

  Fly  1680 SSRNSSPAARRVQNGTRLGNKSSNLSMDSLASPARRAKSSSR-GPQERYSSDQNSLAESMKSSVI 1743
               |..||:.:   |.|...|::  ...|::||.|.:..::| ||..     |..|....|..|:
  Rat   100 ---NRPPASGK---GERAPMKTA--GQGSISSPGRASSGTARPGPVV-----QKGLQPPTKEPVV 151

  Fly  1744 ---TNKTISHESLSGSSKLARIQQINGHSKGAAT------GKIKATQRGSTVGNKSTRQLKQQHN 1799
               |.:|....:||..::........|.:.||::      .::.||:.|......|.||...   
  Rat   152 RGKTPETPKRNTLSSGTRRVLSADSLGPTSGASSPAITRRPRVPATEVGLPQPTPSARQRPL--- 213

  Fly  1800 AMASNGSSPSSVHTTKSAASRLSSVSSTLSTREL---FKQRSISVPAGGTDGAPNKGRHSFLSAK 1861
                         ||::....:||.|...:| ||   .::||:   |||:...|..  .|.:.:.
  Rat   214 -------------TTEAPRKPVSSASEHSAT-ELSPAIRRRSV---AGGSQQKPVS--RSLIPSA 259

  Fly  1862 SREILAKR------------AEKNKLQQQQQQ---QKQTEAPVEERGSVQLRSSAGPLRSSSHSA 1911
            :.::...|            |..::|:.:.||   ..||..|.:.|.|||...||..|.:.:...
  Rat   260 TPQLSPARSGVSPRATPRGPAHTSQLKSKGQQALHPTQTTVPRKNRPSVQSLVSASSLVARTPPG 324

  Fly  1912 VSSMLQQHNLRNSLPSNIPTRRPNT 1936
            ..|:....   :|||:.:|...|.|
  Rat   325 APSVQVPD---DSLPTTLPPSPPAT 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13917NP_647628.1 BTB2_POZ_BTBD8 1110..1227 CDD:349595
BACK_BTBD8 1233..1296 CDD:350565
sbcc <1309..>1531 CDD:129705
Prr36NP_001418795.1 PHA03247 <9..436 CDD:223021 103/413 (25%)
PHA03247 <598..987 CDD:223021
DUF4596 1037..1079 CDD:464673
Blue background indicates that the domain is not in the aligned region.

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