DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13917 and Klhl12

DIOPT Version :9

Sequence 1:NP_001189017.1 Gene:CG13917 / 38186 FlyBaseID:FBgn0035237 Length:2019 Species:Drosophila melanogaster
Sequence 2:XP_038946329.1 Gene:Klhl12 / 266772 RGDID:628717 Length:592 Species:Rattus norvegicus


Alignment Length:573 Identity:108/573 - (18%)
Similarity:188/573 - (32%) Gaps:170/573 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1081 IQTDLSADSSLASSFSRSGMDESSLSCRQPRRLGEDLLKMFLQEIATDMLVEVHGRRIRAHKCIL 1145
            |.|:..|.|.|.   |.:.:.:|:..|                    |:.:.|..:...||:.:|
  Rat    27 IMTNTHAKSILN---SMNSLRKSNTLC--------------------DVTLRVEQKDFPAHRIVL 68

  Fly  1146 RSRCQYFAAMLAGHGSQSV----------VSLQGYSYAAVHFALCHIYSGASHPPDGISLMELAA 1200
            .:...||.||.....:.|:          |.:||.:.:.:...|..:|:...|.... ::.||..
  Rat    69 AACSDYFCAMFTSEVNASLCYLSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVE-NVQELLP 132

  Fly  1201 LADLLGLEGLKEVTAHALKTNYCHNFHKPCSGCSDGILQVLPVALNHALDDLYRKCLRWTCRHYL 1265
            .|.||.|:|:|:.....|::..     .| |.|    |.:...|..|...||.:....::.:|:.
  Rat   133 AACLLQLKGVKQACCEFLESQL-----DP-SNC----LGIRDFAETHNCVDLMQAAEVFSQKHFP 187

  Fly  1266 KVWPTRQFAQLPPDILGRCRQQIVAYMTSDTVLDTVLDCDHLLAQL------SAYRWGHVCEQLV 1324
            :|....:|..|                 |...::.::.||.:....      :...|....::..
  Rat   188 EVVQHEEFILL-----------------SQGEVEKLIKCDEIQVDSEEPVFEAVINWVKHAKKER 235

  Fly  1325 REILEAAYAYVGDHFASLIASDSFLSLGHDRSRHIPRLETLLLHTAAELTPEQACRSYQRVTRLN 1389
            .|.|.....||                      .:|.|....:....:..|...|....|    :
  Rat   236 EESLPDLLQYV----------------------RMPLLTPRYITDVIDAEPFIRCSLQCR----D 274

  Fly  1390 TVLQAKVIHMPASLGQSELARELQGLQEEQLDWQPEYIRLVGAL------VYAVEQ--------C 1440
            .|.:||..|:     :.||..::||.:........|.:.:||..      :..||:        .
  Rat   275 LVDEAKKFHL-----RPELRSQMQGPRTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWS 334

  Fly  1441 LIRQCSRAMRVTAWQRMDLELRKKIQTL------ARLT--EPLDMKR-QNG-----KPVGKAFSF 1491
            .:...:|..|..|    .:.|..:|..:      :||:  |.||... ::|     .|:......
  Rat   335 FLPSITRKRRYVA----SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL 395

  Fly  1492 GGSTRSQDLVQIKLAIQAQTKRANAQETLMYKATQTQDAAGGAGHVQTADRGVQANHESREGGSK 1556
            .|:|...|::.:.....     .:.:.|.|.:.....|.....|.:|||          |||...
  Rat   396 AGATTLGDMIYVSGGFD-----GSRRHTSMERYDPNIDQWSMLGDMQTA----------REGAGL 445

  Fly  1557 LLKS---------------NS-RAYVPHRAS----SQVATERNS-----LNLH 1584
            ::.|               || ..|.||...    :.:||:|:.     ||.|
  Rat   446 VVASGIIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDH 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13917NP_001189017.1 BTB 1117..>1185 CDD:279045 15/77 (19%)
BTB 1128..>1191 CDD:197585 16/72 (22%)
BACK 1238..>1281 CDD:197943 9/42 (21%)
Klhl12XP_038946329.1 BTB_POZ_KLHL12_C3IP1_DKIR 29..159 CDD:349551 34/159 (21%)
PHA03098 63..574 CDD:222983 98/514 (19%)
BACK_KLHL12 154..289 CDD:350527 30/192 (16%)
KELCH repeat 298..339 CDD:276965 5/40 (13%)
KELCH repeat 343..389 CDD:276965 10/49 (20%)
KELCH repeat 393..436 CDD:276965 7/47 (15%)
KELCH repeat 440..483 CDD:276965 9/42 (21%)
KELCH repeat 487..531 CDD:276965 4/12 (33%)
KELCH repeat 534..579 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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