DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12004 and tmem184a

DIOPT Version :9

Sequence 1:NP_001097474.1 Gene:CG12004 / 38185 FlyBaseID:FBgn0035236 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_998685.2 Gene:tmem184a / 406841 ZFINID:ZDB-GENE-040426-2925 Length:420 Species:Danio rerio


Alignment Length:500 Identity:253/500 - (50%)
Similarity:307/500 - (61%) Gaps:95/500 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTTAASLIEAALNASSGNATATTAGSLEATGKPNYVVQVKNTPMSTPLDPLLH----------- 54
            |:.|...::.|:.:.:..|...           |:|.:...||       .||:           
Zfish     1 MNETTLRILSASSDKNMDNVPL-----------PSYSLLSNNT-------DLLNKTVIRSANGTE 47

  Fly    55 --VGDGIFLQTKTAQVLAGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWI 117
              ..|.|||.|.|||.|:|:.||:||.:||.|||.|||.||.|.|||:|:||||||||||..||:
Zfish    48 VVADDQIFLSTATAQALSGIFVWSALILTCHQIYLHLRSYTVPNEQRYIIRILFIVPIYAFDSWL 112

  Fly   118 SLLFFNSDNVYIYFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEIRGKPIKTSCLYGTCCLKG 182
            ||||..:|..|:||.:||||||||||||||||.:||||||..||||||||||::|||||||||.|
Zfish   113 SLLFITNDQYYVYFDSVRDCYEAFVIYNFLSLSFEYLGGESAIMSEIRGKPIQSSCLYGTCCLVG 177

  Fly   183 KTYTIGFLRFCKQATLQFCLVKPLVAFIIIFLQAFGHYHDGDWSADGGYIYITIIYNISVSLALY 247
            .:|:|||||||||||||||:|||::|.|.|.|||||.|||||::..|||:|||||||.|||||||
Zfish   178 MSYSIGFLRFCKQATLQFCVVKPIMAVITILLQAFGKYHDGDFNVTGGYLYITIIYNFSVSLALY 242

  Fly   248 GLYLFYFATRDLLTPFEPVLKFCTIKSVIFLSFWQGVGLAILEKANVI--SPIVDSAGTVTVEPG 310
            .|:||||||.|||.||||||||.|||||||||||||:.|||||:..||  :..:|..   .|..|
Zfish   243 ALFLFYFATSDLLRPFEPVLKFLTIKSVIFLSFWQGMVLAILERCGVIPEAQFIDGH---EVGAG 304

  Fly   311 TVSAGYQNFFICIEMLFAAIALRYAFPYQVYARSCISDGHGRSVTMQSISSSLKETMNPKDIMTD 375
            ||:||:|||.|||||.||:|||||||...|| |...::.......|..|||.||||:||.|::.|
Zfish   305 TVAAGWQNFIICIEMFFASIALRYAFTSSVY-REKKNEAPENVAPMHGISSGLKETINPGDMVQD 368

  Fly   376 AIHNFHPQYQQYTQYSSGGKNSRGIRVSSYDPDDPSSGAAAGGMQASQPTSGGYDAVATGPGSGG 440
            |||||.|.||||||.|:                          .:..||::.|...::|      
Zfish   369 AIHNFSPAYQQYTQQST--------------------------QEVVQPSANGKPGIST------ 401

  Fly   441 NGGSNCMASKTLGNQRKFQPGGQRVATISQNYNEKTMLLSSDDEY 485
                    ||                  |...::|.||:.:|||:
Zfish   402 --------SK------------------STKKSDKVMLIDTDDEF 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12004NP_001097474.1 Solute_trans_a 66..339 CDD:397604 196/274 (72%)
tmem184aNP_998685.2 Solute_trans_a 61..333 CDD:281602 196/274 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 406 1.000 Domainoid score I677
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 490 1.000 Inparanoid score I1377
OMA 1 1.010 - - QHG55062
OrthoDB 1 1.010 - - D411703at33208
OrthoFinder 1 1.000 - - FOG0000529
OrthoInspector 1 1.000 - - otm24889
orthoMCL 1 0.900 - - OOG6_100407
Panther 1 1.100 - - LDO PTHR23423
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1310
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.980

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