DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmep and CG6836

DIOPT Version :10

Sequence 1:NP_001097474.1 Gene:Tmep / 38185 FlyBaseID:FBgn0035236 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_649079.2 Gene:CG6836 / 40070 FlyBaseID:FBgn0036834 Length:328 Species:Drosophila melanogaster


Alignment Length:282 Identity:52/282 - (18%)
Similarity:90/282 - (31%) Gaps:102/282 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 IVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEIR 165
            |:.:..:|.|...|||     |....|....|.|....       |.:|.:.|:|.|.|.:.|..
  Fly    93 IISVAALVTILVPYSW-----FICHTVMHVMFMVGGPV-------FRTLLFRYVGSEQNYVKETA 145

  Fly   166 GKPIKTSCLYGTCCLKGKTYTIGFLRFCKQATLQFCLVKPLV---------AFIIIFLQAFGHYH 221
            |:.::.:.....||                     ||..|:|         :..:::...|    
  Fly   146 GEAVQLNTPPCCCC---------------------CLCLPMVIPTKAKLCISRYMVWQMPF---- 185

  Fly   222 DGDWSADGGYIYITIIYNISV--SLALYGLYLFYF----------------ATRDLLTP------ 262
               |...     |.::.||..  .:.||...:|:|                .|..::|.      
  Fly   186 ---WQGS-----IMLVMNILYYRDIQLYRQVMFFFIPFIVCSIVLGAWSLQITVRMITKVRGDYQ 242

  Fly   263 -------FEPVLKFCTIKSVIFLSFWQGVGLAILEKANVISPIVDSAGTVTVEPGTVSAGYQNFF 320
                   .:.|:..|.::.::......|:      |.....||     ..||...|:.    |..
  Fly   243 LRKKMFCLQLVVMLCKLQYLVLYDQLDGI------KMGGEYPI-----NHTVYKQTII----NIL 292

  Fly   321 ICIEMLFAAIALRYAF--PYQV 340
            |.:||:..::.::.|:  |.||
  Fly   293 ILVEMVLVSMMVQSAYRTPVQV 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmepNP_001097474.1 Solute_trans_a 66..341 CDD:460991 52/282 (18%)
CG6836NP_649079.2 Solute_trans_a 50..309 CDD:460991 49/275 (18%)

Return to query results.
Submit another query.