DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12004 and Tmem184a

DIOPT Version :9

Sequence 1:NP_001097474.1 Gene:CG12004 / 38185 FlyBaseID:FBgn0035236 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_038945317.1 Gene:Tmem184a / 304325 RGDID:1306702 Length:460 Species:Rattus norvegicus


Alignment Length:474 Identity:242/474 - (51%)
Similarity:304/474 - (64%) Gaps:69/474 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AGSLEATGKPNYVVQVKNTPMSTPLDPLLHVG-------DG------IFLQTKTAQVLAGVCVWA 76
            :|.|:..|.| .|......|...|..|::..|       :|      :||.:..|:.::||.||.
  Rat    40 SGFLKTAGAP-LVSATWLPPSPPPAMPMVAAGPQMERVDNGSQGAPQLFLTSALARGVSGVFVWT 103

  Fly    77 ALFITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYEAF 141
            ||.:|..|||.|||.||.|:|||:::|:||||||||..||:|||.......|:||.:||||||||
  Rat   104 ALLLTGHQIYSHLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLLLLGGHPYYVYFDSVRDCYEAF 168

  Fly   142 VIYNFLSLCYEYLGGEGNIMSEIRGKPIKTSCLYGTCCLKGKTYTIGFLRFCKQATLQFCLVKPL 206
            |||:||:||::|||||..||:|||||||::||.||||||:|.:|:|.|||||||||||||:|||:
  Rat   169 VIYSFLTLCFQYLGGESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPV 233

  Fly   207 VAFIIIFLQAFGHYHDGDWSADGGYIYITIIYNISVSLALYGLYLFYFATRDLLTPFEPVLKFCT 271
            :|.|.|.||||..|||||::...||:|:|::||.|||||||.|:||||||||||.||||||||.|
  Rat   234 MALITIILQAFDKYHDGDFNIHSGYLYVTLVYNASVSLALYALFLFYFATRDLLRPFEPVLKFLT 298

  Fly   272 IKSVIFLSFWQGVGLAILEKANVISPIVDSAGTVTVEPGTVSAGYQNFFICIEMLFAAIALRYAF 336
            ||::||||||||:.|||||:..|| |.|.:.....|..||::||||||.||||||||::||||||
  Rat   299 IKAIIFLSFWQGMLLAILERCGVI-PEVQAVDGTRVGAGTLAAGYQNFLICIEMLFASLALRYAF 362

  Fly   337 PYQVYARSCISDGHGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSSGGKNSRGIR 401
            |.|||:..  .:.......||||||.||||::|:||:.||||||.|.||||||.|:         
  Rat   363 PSQVYSEK--KNSPAPPAPMQSISSGLKETISPQDIVQDAIHNFSPAYQQYTQQST--------- 416

  Fly   402 VSSYDPDDPSSGAAAGGMQASQPTSGGYDAVAT--GPGSGGNGGSNCMASKTLGNQRKFQPGGQR 464
                             .:|..|..||:.:.:|  ||.||..||..                   
  Rat   417 -----------------HEAPGPGQGGHPSPSTHPGPASGSGGGKK------------------- 445

  Fly   465 VATISQNYNEKTMLLSSDD 483
                |:|. ||.||:.|:|
  Rat   446 ----SRNI-EKRMLIPSED 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12004NP_001097474.1 Solute_trans_a 66..339 CDD:397604 181/272 (67%)
Tmem184aXP_038945317.1 Solute_trans_a 96..365 CDD:397604 180/269 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 400 1.000 Domainoid score I715
eggNOG 1 0.900 - - E1_KOG2641
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 465 1.000 Inparanoid score I1478
OMA 1 1.010 - - QHG55062
OrthoDB 1 1.010 - - D411703at33208
OrthoFinder 1 1.000 - - FOG0000529
OrthoInspector 1 1.000 - - otm45765
orthoMCL 1 0.900 - - OOG6_100407
Panther 1 1.100 - - LDO PTHR23423
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1310
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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