DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12004 and Tmem184c

DIOPT Version :9

Sequence 1:NP_001097474.1 Gene:CG12004 / 38185 FlyBaseID:FBgn0035236 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_006255484.1 Gene:Tmem184c / 291946 RGDID:727852 Length:545 Species:Rattus norvegicus


Alignment Length:419 Identity:133/419 - (31%)
Similarity:189/419 - (45%) Gaps:89/419 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PLLHVGDGIFLQTKTAQVLAGVCVW----------------AALF------ITCQQIYQHLRWYT 93
            |||     |.|......|...||:|                |.:|      ::...|.|||..||
  Rat    58 PLL-----ILLYALAILVTVPVCIWEFQKLKVGIHTKVWFIAGIFLLLTIPVSMCGILQHLVHYT 117

  Fly    94 NPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYIYFFTVRDCYEAFVIYNFLSLCYEYLGGE- 157
            .|:.|:.|:|||::||||:..||::|.:   ..:.||..|.|:||||:|||||:.....||... 
  Rat   118 QPELQKPIIRILWMVPIYSLDSWVALKY---PKIAIYVDTWRECYEAYVIYNFMIFLTNYLTIRF 179

  Fly   158 GNIMSEIRGKPIKTSCLYGTCCLKGKTYTIG-FLRF-CKQATLQFCLVKPLVAFIIIFLQAFGHY 220
            .|:|..:..|. :.:.|...||.  ..:.:| .|.| ||...||:.:|:|:.....:..:..|.|
  Rat   180 PNLMLHLEAKD-QQNHLPPLCCC--PPWAMGEMLLFRCKLGVLQYTVVRPITTVTSLVCEILGVY 241

  Fly   221 HDGDWSADGGYIYITIIYNISVSLALYGLYLFYFATRDLLTPFEPVLKFCTIKSVIFLSFWQGVG 285
            .:|::|....:.|:.|:.|:|...|:|.|.|||...::.|:|.:||.||..:|.|:|:||||.|.
  Rat   242 DEGNFSFSNAWTYLVILNNLSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVL 306

  Fly   286 LAILEKANVISPIVDSAGTVTVEPGT--------VSAGYQNFFICIEMLFAAIALRYAFPYQVYA 342
            :|:|.|..|||           |..|        |:.|.|:|.|||||.|||||..|.|.|:.|.
  Rat   307 IALLVKVGVIS-----------EKRTWEWQSAEAVATGLQDFIICIEMFFAAIAHHYTFSYKPYV 360

  Fly   343 RS-----CISDGHGRSVTMQSISSSLKETMNPKDIMTDAIHNFHPQYQQYTQYSSGGKNSRGIRV 402
            ..     |...    .:.|..:|          ||..|...          |....|:..||...
  Rat   361 HEAEEGPCFDS----FLAMWDVS----------DIREDISE----------QVRRVGRTMRGYPK 401

  Fly   403 SSYDPDDP-----SSGAAAGGMQASQPTS 426
            ....|.||     ||..:|....:|:|:|
  Rat   402 KKCFPGDPDHNEHSSLLSASSQDSSKPSS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12004NP_001097474.1 Solute_trans_a 66..339 CDD:397604 107/305 (35%)
Tmem184cXP_006255484.1 Solute_trans_a 90..358 CDD:281602 104/284 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D411703at33208
OrthoFinder 1 1.000 - - FOG0000529
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100407
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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