Sequence 1: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_188725.3 | Gene: | AT3G20890 / 821638 | AraportID: | AT3G20890 | Length: | 292 | Species: | Arabidopsis thaliana |
Alignment Length: | 333 | Identity: | 71/333 - (21%) |
---|---|---|---|
Similarity: | 109/333 - (32%) | Gaps: | 99/333 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 671 YNGNSNG-----NGPNYPN--DNGGAGVIQRPRQEDVF------------------VRVHNCEYA 710
Fly 711 TRANDLGELFSLEHLRIEHIEQLFNERNQS-SGEFIVEFSDPASCKLAIREFHNRRFRGRG-LRV 773
Fly 774 VAITPQE----IADRMKKPFMDYLPGGNGPRKAETNNANDGAGGNKASAQPSRRRGPSRFDKPQE 834
Fly 835 QPSQQQDRPLSLEREDNSSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSI 899
Fly 900 IPDKFNRPGCVVAMRNVPFKAELKDIMRFFSDYKLSPDDIIRRFNDEGKPTGDTRVAFESPSEAR 964
Fly 965 SAFESRRK 972 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | |||
RRM | <364..551 | CDD:223796 | |||
RRM_SF | 478..549 | CDD:240668 | |||
RRM_SF | 702..773 | CDD:240668 | 17/72 (24%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | 24/63 (38%) | ||
AT3G20890 | NP_188725.3 | RRM_hnRNPH_ESRPs_RBM12_like | 60..127 | CDD:409699 | 16/72 (22%) |
RRM_hnRNPH_ESRPs_RBM12_like | 205..277 | CDD:409699 | 24/63 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001433 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |