Sequence 1: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012820298.2 | Gene: | rbm12b.2 / 734026 | XenbaseID: | XB-GENE-5751350 | Length: | 695 | Species: | Xenopus tropicalis |
Alignment Length: | 1046 | Identity: | 189/1046 - (18%) |
---|---|---|---|
Similarity: | 308/1046 - (29%) | Gaps: | 466/1046 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSVIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGEMGDAFIAFSTDEDARCAMLKDREKLM 65
Fly 66 EIQVRLLLSSRAEMQKVIETARKAASAQAPVSVPVPMPVVVPVTAAKVAGPAAPLPPIIGGLNTF 130
Fly 131 LGQGQVKGVATGTVPSFLTYQQQAGITLSDVTGRRSRSRSSSSDDSDRERERDRQRERERGRKRR 195
Fly 196 SDRLDKSQERELKMVAGGGALPSPWAQPPQNQLPAVGLGLNMGLNLNLPQIPSLQSYTTSTTTTN 260
Fly 261 VTNNYNLEPSATSVQLLTALQQVSSGSAAPAQPSKSESEPIAFASVNPYAQMYPQLFQQQQMLLQ 325
Fly 326 QQQTQAKVSPTMGGSPGGGSTPQV-------VADTCYIRMSGMCQNTSYSDIRKYFQGMYIPHNG 383
Fly 384 IKIMMVNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVPVGDDEF-----------EMAE 437
Fly 438 ERASRQGQDGSRSHGNHNGGDRGERGGGAPVPVPRPVTNVLYIEDLPQTTTEQDIMKMF---SAS 499
Fly 500 YTVVDILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDM-----QNA 559
Fly 560 KEKQRRANEQLLKEEADQREELLKDQQRRQKQQQQENENIQANRFAADPRRRQAEDQQQQQQMNM 624
Fly 625 GP-------NFNSNMSPNMMAPFVNGGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNSNGNGPNY 682
Fly 683 PNDNGGAGVIQRPRQEDVFVRVHNCEYATRANDLGELFSLEHLRIEHIEQLFNERNQSSGEFIVE 747
Fly 748 FSDPASCKLAIREFHNRRFRGRGLRVVAITPQEIADRMKKPFMDYLPGGNGPRKAETNNANDGAG 812
Fly 813 GNKASAQPSRRR-------GPS------RFDKPQEQPS----------QQQDRPLSLERED---N 851
Fly 852 SSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSIIP-DKFNRPGC-VVAMR 914
Fly 915 NVPFKAELKDIMRFFSDYKLSPDDIIRRFNDEGKPTGDTRVAFESPSEARSAFESRRKKQIFNRT 979
Fly 980 VYLDII 985 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | 35/72 (49%) |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | 19/69 (28%) | ||
RRM | <364..551 | CDD:223796 | 41/200 (21%) | ||
RRM_SF | 478..549 | CDD:240668 | 16/73 (22%) | ||
RRM_SF | 702..773 | CDD:240668 | 11/70 (16%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | 18/71 (25%) | ||
rbm12b.2 | XP_012820298.2 | RRM_SF | 56..129 | CDD:418427 | 35/72 (49%) |
RRM_SF | 168..253 | CDD:418427 | 22/85 (26%) | ||
RRM_SF | 293..373 | CDD:418427 | 19/82 (23%) | ||
RRM_SF | 407..482 | CDD:418427 | 20/154 (13%) | ||
RRM_SF | 629..693 | CDD:418427 | 16/69 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 186 | 1.000 | Inparanoid score | I3795 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D132643at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001433 | |
OrthoInspector | 1 | 1.000 | - | - | otm48083 | |
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.160 |