Protein Alignment CG7879 and rbm12b.2

DIOPT Version :10

• Sequence 1: NP_647626.1
• Gene: CG7879 / 38184
• FlyBaseID: FBgn0035235
• Length: 985
• Species: Drosophila melanogaster
• Sequence 2: XP_012820298.2
• Gene: rbm12b.2 / 734026
• XenbaseID: XB-GENE-5751350
• Length: 695
• Species: Xenopus tropicalis
• Alignment Length: 1046
• Identity: 189/1046 - (18%)
• Similarity: 308/1046 - (29%)
• Gaps: 466/1046 - (44%)

  Fly     1 MSVIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGEMGDAFIAFSTDEDARCAMLKDREKLM 65
            |||:|:||.|...||:.|||.|||.|.||:|.::|.||:.|:|||.||:.||||.|:......|.
 Frog    55 MSVVIKLQGLSIEANSIDIRQFFSNLDIPKGYIYITGGKYGEAFIIFSSYEDARRAISYSGRPLK 119

  Fly    66 EIQVRLLLSSRAEMQKVIETARKAASAQAPVSVPVPMPVVVPVTAAKVAGPAAPLPPIIGGLNTF 130
            ...|.|.:||:||||:
 Frog   120 NSSVHLSISSQAEMQR------------------------------------------------- 135

  Fly   131 LGQGQVKGVATGTVPSFLTYQQQAGITLSDVTGRRSRSRSSSSDDSDRERERDRQRERERGRKRR 195
                                                                             
 Frog   136 ----------------------------------------------------------------- 135

  Fly   196 SDRLDKSQERELKMVAGGGALPSPWAQPPQNQLPAVGLGLNMGLNLNLPQIPSLQSYTTSTTTTN 260
                                                                             
 Frog   136 ----------------------------------------------------------------- 135

  Fly   261 VTNNYNLEPSATSVQLLTALQQVSSGSAAPAQPSKSESEPIAFASVNPYAQMYPQLFQQQQMLLQ 325
                              ||::::|                .|:|||
 Frog   136 ------------------ALEEINS----------------RFSSVN------------------ 148

  Fly   326 QQQTQAKVSPTMGGSPGGGSTPQV-------VADTCYIRMSGMCQNTSYSDIRKYFQGMYIPHNG 383
                          |..|..||..       ..||.|:.:.||..||:..:|:.:|.|:.: .:.
 Frog   149 --------------SASGNGTPSYKETSYFRKPDTLYVYVHGMPLNTTKVEIKSFFVGLTV-EDA 198

  Fly   384 IKIMMVNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVPVGDDEF-----------EMAE 437
            |.:...:|.|.|.|.|:|:....|.:||:|:........:.::...:.|:           |::.
 Frog   199 IFLKYPSGLRNGNAIVKFTTSGDAHEAVKRSGQQMGSTPVSLMLSDEAEWIKVGGVRARKRELSP 263

  Fly   438 ERASRQGQDGSRSHGNHNGGDRGERGGGAPVPVPRPVTNVLYIEDLPQTTTEQDIMKMF---SAS 499
            | .|...:..|..|..|   :..:....:|..     ...:::.:||...:::||...|   :..
 Frog   264 E-VSFDDRKKSVPHSRH---ELIKTRARSPYE-----ERFVHLINLPYDVSKRDIKVHFGNLAMK 319

  Fly   500 YTVVDILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDM-----QNA 559
            .:.:..|...|.|..||  .||.|....:...|.....|.:.. |.:.|...||.||     :..
 Frog   320 DSQITFLCDWSGKRTRE--GFVKFTSINQYRDACAQHRKEFCS-RLVDVLPISERDMMDLIARTG 381

  Fly   560 KEKQRRANEQLLKEEADQREELLKDQQRRQKQQQQENENIQANRFAADPRRRQAEDQQQQQQMNM 624
            |:.:.|:              |.||..::..|:.                             |:
 Frog   382 KKPRERS--------------LRKDSPKKCSQES-----------------------------NL 403

  Fly   625 GP-------NFNSNMSPNMMAPFVNGGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNSNGNGPNY 682
            |.       ||.||::...:..|.:|.::
 Frog   404 GKGKCIYLRNFASNVTKPDIQNFFSGFSL------------------------------------ 432

  Fly   683 PNDNGGAGVIQRPRQEDVFVRVHNCEYATRANDLGELFSLEHLRIEHIEQLFNERNQSSGEFIVE 747
                         ::||:|:...|       |.:|                       .||.:|.
 Frog   433 -------------KEEDIFLLYDN-------NGIG-----------------------LGEALVV 454

  Fly   748 FSDPASCKLAIREFHNRRFRGRGLRVVAITPQEIADRMKKPFMDYLPGGNGPRKAETNNANDGAG 812
            ||.....: :.::.|.::|:|..:.:..|..|::     |.|     |.|...:.......:.|.
 Frog   455 FSTEKEAE-STKKLHCKKFQGTEILLSCINEQQM-----KAF-----GVNTSARQSEAKIQEQAP 508

  Fly   813 GNKASAQPSRRR-------GPS------RFDKPQEQPS----------QQQDRPLSLERED---N 851
            ..||.| |:|..       |.|      ..|.|.:..|          |..|.|.:|...|   |
 Frog   509 EYKARA-PARETHLPVTEVGASVNMKCEHLDLPVKLQSSKLPVAYETLQSLDLPFTLGSTDFPKN 572

  Fly   852 SSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSIIP-DKFNRPGC-VVAMR 914
            ...:.||..:....|....|.|.....:   |.|.| |.|||   ..:|| :..|:.|. ||.::
 Frog   573 EDFAENALHRAVDTPSIAKDVPFIQIQV---NSGSV-PDSPV---KDVIPNNNGNQNGVGVVLVK 630

  Fly   915 NVPFKAELKDIMRFFSDYKLSPDDIIRRFNDEGKPTGDTRVAFESPSEARSAFESRRKKQIFNRT 979
            ::|....:.:.:.||..||:|..::.:..|      |..||.|::..||..|.:....|.:.:..
 Frog   631 HLPRTFTVSEALDFFHGYKVSSVNLAQIGN------GVARVRFQTHKEAVDAVKDLNNKPVGHHK 689

  Fly   980 VYLDII 985
            |:|.::
 Frog   690 VFLALV 695

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7879	NP_647626.1	RRM1_RBM12_like	2..75	CDD:409932	35/72 (49%)
		RRM_hnRNPH_ESRPs_RBM12_like	355..425	CDD:409699	19/69 (28%)
		RRM_SF	478..549	CDD:409669	16/73 (22%)
		RRM_SF	700..773	CDD:409669	12/72 (17%)
		RRM5_RBM12_like	909..983	CDD:409937	18/74 (24%)
rbm12b.2	XP_012820298.2	RRM_SF	56..129	CDD:473069	35/72 (49%)
		RRM_SF	168..253	CDD:473069	22/85 (26%)
		RRM_SF	293..373	CDD:473069	19/82 (23%)
		RRM_SF	407..482	CDD:473069	20/154 (13%)
		RRM_SF	629..693	CDD:473069	16/69 (23%)