Protein Alignment CG7879 and rbm12b

DIOPT Version :10

• Sequence 1: NP_647626.1
• Gene: CG7879 / 38184
• FlyBaseID: FBgn0035235
• Length: 985
• Species: Drosophila melanogaster
• Sequence 2: NP_001039079.1
• Gene: rbm12b / 733876
• XenbaseID: XB-GENE-22063327
• Length: 418
• Species: Xenopus tropicalis
• Alignment Length: 570
• Identity: 93/570 - (16%)
• Similarity: 157/570 - (27%)
• Gaps: 309/570 - (54%)

  Fly     1 MSVIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGEMGDAFIAFSTDEDARCAMLKDREKLM 65
            |..|:||:.|...|::.||..||.|.::.:  :.|:.||.|:|||.|.:|..||.|:.|....:.
 Frog     1 METIVRLEGLHADADSTDIEEFFKGFNVSD--IQIVRGERGEAFIVFGSDNHAREAIKKTGSWIK 63

  Fly    66 EIQVRLLLSSRAEMQKVIETARKAASAQAPVSVPVPMPVVVPVTAAKVAGPAAPLPPIIGGLNTF 130
            ..::.|.||::.||....|..||              .||..:.|||
 Frog    64 NKRILLTLSNKTEMLCAFEVYRK--------------KVVQTLEAAK------------------ 96

  Fly   131 LGQGQVKGVATGTVPSFLTYQQQAGITLSDVTGRRSRSRSSSSDDSDRERERDRQRERERGRKRR 195
                                                                      ::.|||:
 Frog    97 ----------------------------------------------------------QQSRKRK 103

  Fly   196 SDRLDKSQERELKMVAGGGALPSPWAQPPQNQLPAVGLGLNMGLNLNLPQIPSLQSYTTSTTTTN 260
            .|
 Frog   104 VD--------------------------------------------------------------- 105

  Fly   261 VTNNYNLEPSATSVQLLTALQQVSSGSAAPAQPSKSESEPIAFASVNPYAQMYPQLFQQQQMLLQ 325
                                                                         |||.
 Frog   106 -------------------------------------------------------------MLLA 109

  Fly   326 QQQTQAKVSPTMGGSPGGGSTPQVVADTCYIRMSGMCQNTSYSDIRKYFQGMYIPHNGIKIMMV- 389
            |              ||          :.|:.:||:.|.|..:.|..:|:.:.:.    :|:..
 Frog   110 Q--------------PG----------SLYVYLSGISQETKEAGIIDFFKSLAVE----QIIFCK 146

  Fly   390 --NGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVPVGDDEFEMAE---ERAS--RQGQDG 447
              :||:||..:|:|:.|..|.:|::.|..:...:.:.::...::::..|.   |:.|  |:|
 Frog   147 GRDGSKTGNGFVKFTNVVHANEALKFNKCLLDKQCLSVISASEEQWVNAGGTLEKTSKIREG--- 208

  Fly   448 SRSHGNHNGGDRGERGGGAPVPVPRPVTNV----------LYIEDLPQTTTEQDI--------MK 494
                                      .|||          :|:.:||....:.||        ::
 Frog   209 --------------------------FTNVIASMHQQQFYIYLLNLPPKVKKSDIRDLLEDPQLE 247

  Fly   495 MFSASYTVVDILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFR 544
            .|:.|      ||:.|.|..    .||:|..|::..:||....||...:|
 Frog   248 DFNIS------LLTSSSKGE----GFVMFKNESQYQAALLAHGKHLHDYR 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7879	NP_647626.1	RRM1_RBM12_like	2..75	CDD:409932	25/72 (35%)
		RRM_hnRNPH_ESRPs_RBM12_like	355..425	CDD:409699	18/72 (25%)
		RRM_SF	478..549	CDD:409669	20/75 (27%)
		RRM_SF	700..773	CDD:409669
		RRM5_RBM12_like	909..983	CDD:409937
rbm12b	NP_001039079.1	RRM_SF	4..77	CDD:473069	26/74 (35%)
		RRM_SF	114..197	CDD:473069	19/86 (22%)
		RRM_SF	221..298	CDD:473069	20/77 (26%)
		RRM_SF	322..397	CDD:473069