DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7879 and ESRP1

DIOPT Version :10

Sequence 1:NP_647626.1 Gene:CG7879 / 38184 FlyBaseID:FBgn0035235 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_060167.2 Gene:ESRP1 / 54845 HGNCID:25966 Length:681 Species:Homo sapiens


Alignment Length:735 Identity:142/735 - (19%)
Similarity:243/735 - (33%) Gaps:240/735 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 PQIPSLQSYTTSTTTTNVTNNYNLEPSATSVQLLTALQQVSSGSAAPAQPSKSESEPIAFASVNP 308
            |..|.:.....:|    :|...|.|.| :||....|.|....|:...|.    .|||        
Human   148 PGSPDIDKLDVAT----MTEYLNFEKS-SSVSRYGASQVEDMGNIILAM----ISEP-------- 195

  Fly   309 YAQMYPQLFQQQQMLLQQQQTQAKVSPTMGGSPGGGSTPQVVADTCYIRMSGMCQNTSYSDIRKY 373
                |...|...:.:..:.::            |..|..:::.|...:|..|:...:|..||.::
Human   196 ----YNHRFSDPERVNYKFES------------GTCSKMELIDDNTVVRARGLPWQSSDQDIARF 244

  Fly   374 FQGMYIPHNGIKIMM-VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIV-PVGDDEFEMA 436
            |:|:.|...|..:.: ..|.|.|.|.|.|........|:||:......|.|::. ..|:|..::|
Human   245 FKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIA 309

  Fly   437 EERASRQGQDGSRSHGNHNGGDRGERGGGAPVPVPRPVTNVLYIEDLPQTTTEQDIMKMFSASYT 501
            ...::...|..|:.:                       ..::.:..||.|.|.::::..|.....
Human   310 GGTSNEVAQFLSKEN-----------------------QVIVRMRGLPFTATAEEVVAFFGQHCP 351

  Fly   502 VV----DILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDMQNAKEK 562
            :.    .||....|..|....||||||.|..|.:||: ..|..:|.|.:.:..|:..::|     
Human   352 ITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALR-KHKDLLGKRYIELFRSTAAEVQ----- 410

  Fly   563 QRRANEQLLKEEADQREELLKDQQRRQKQQQQENENIQANRFAADPRRRQAEDQQQQQQMNMGPN 627
                  |:|                              |||::.|                   
Human   411 ------QVL------------------------------NRFSSAP------------------- 420

  Fly   628 FNSNMSPNMMAPFVNGGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNSNGNGPNYPNDNGGAGVI 692
                :.|....|.:         |.|.|..|.  |.|:.:                         
Human   421 ----LIPLPTPPII---------PVLPQQFVP--PTNVRD------------------------- 445

  Fly   693 QRPRQEDVFVRVHNCEYATRAND----LGELFSLEHLRIEHIEQLFNERNQSSGEFIVEFSDPAS 753
                    .:|:....||....|    ||| |:.: :|...:..:.|.:.:.||:..::......
Human   446 --------CIRLRGLPYAATIEDILDFLGE-FATD-IRTHGVHMVLNHQGRPSGDAFIQMKSADR 500

  Fly   754 CKLAIREFHNRRFRGRGLRVVAITPQEIADRMKKPFMDY-LPGGNGPRKAETNNANDGAGGNKAS 817
            ..:|.::.|.:..:.|.:.|...:.:|         |:: |.||...|             |..|
Human   501 AFMAAQKCHKKNMKDRYVEVFQCSAEE---------MNFVLMGGTLNR-------------NGLS 543

  Fly   818 AQPSRR--RGPSRFDKPQE-----------QPSQQQDRPLSLEREDNSSTSSNAPVKQHFNPFAR 869
            ..|.:.  ..|..:..|..           |||...: |.:|:    .||:......|.|..:..
Human   544 PPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVILN-PRALQ----PSTAYYPAGTQLFMNYTA 603

  Fly   870 --PDPPLSSSSL----SPSNQGQVKPTSPVPVPTSIIPDKFNRPGCVVAMRNVPFKAELKDIMRF 928
              |.||.|.:||    :.:|...|.|                :||.||.|:.:.:...:|:|:.|
Human   604 YYPSPPGSPNSLGYFPTAANLSGVPP----------------QPGTVVRMQGLAYNTGVKEILNF 652

  Fly   929 FSDYKLSPDDIIRRFNDEGK 948
            |..|:.:.:|.:...||:.:
Human   653 FQGYQYATEDGLIHTNDQAR 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7879NP_647626.1 RRM1_RBM12_like 2..75 CDD:409932
RRM_hnRNPH_ESRPs_RBM12_like 355..425 CDD:409699 20/70 (29%)
RRM_SF 478..549 CDD:409669 22/74 (30%)
RRM_SF 700..773 CDD:409669 15/76 (20%)
RRM5_RBM12_like 909..983 CDD:409937 11/40 (28%)
ESRP1NP_060167.2 DnaQ_like_exo 29..168 CDD:447876 5/23 (22%)
RRM1_ESRP1 216..308 CDD:410134 24/91 (26%)
RRM2_ESRP1 310..419 CDD:410136 31/173 (18%)
RRM3_ESRP1_ESRP2 444..524 CDD:410138 16/114 (14%)
RRM_SF 633..>672 CDD:473069 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.

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