Sequence 1: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001003856.1 | Gene: | rbm12 / 445379 | ZFINID: | ZDB-GENE-081022-16 | Length: | 876 | Species: | Danio rerio |
Alignment Length: | 1106 | Identity: | 252/1106 - (22%) |
---|---|---|---|
Similarity: | 393/1106 - (35%) | Gaps: | 353/1106 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSVIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGEMGDAFIAFSTDEDARCAMLKDREKLM 65
Fly 66 EIQVRLLLSSRAEMQKVIETARKA-ASAQAPVSVPVPMPVVVPVTAAKVAGPAA-PLPPIIGGLN 128
Fly 129 TFLGQGQVKGVATGTVPSFLTYQQQAGITLSDVTGRRSRSRSSSSDDSDRERERDRQRERERGRK 193
Fly 194 RRSDRLDKSQERELKMVAGGGALPSPWAQPPQNQL--PAVGLGLNM-----GLNLNLPQIPSLQS 251
Fly 252 YTT-----------------STTTTNVTNNYNLEPSATSVQLLTALQQVSSGSAAPAQP---SKS 296
Fly 297 ESEPIAFASVNPYAQMYPQLFQQQQMLLQQQQTQAKVSPTMGGSPGGGSTPQVVADTCYIRMSGM 361
Fly 362 CQNTSYSDIRKYFQGMYIPHNGIKIMMVN-GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQI 425
Fly 426 VPVGDDEFEMAEERASRQGQDGSRSHGNHNGGDRGERGGGAPVP---------VPRPVTNVLYIE 481
Fly 482 DLPQTTTEQDIMKMFSASYTVVD-ILLSPSPKNRRESVAFVLFAREAEADSALQDTSKHYIGFRQ 545
Fly 546 LRVRSSSEEDMQNAKEKQRRANEQLLKEEADQREELLKDQQRRQKQQQQENENIQANRFAADPRR 610
Fly 611 RQAEDQQQQQQMNMGPNFNSNMSPNMMAPFVNGGNMPFHMPPLQQNGVNNFPFNMNNNYNYNGNS 675
Fly 676 NGNGPNYPNDNGGAGVIQRPRQEDVFVRVHNCEYATRANDLGELFSLEHLRIEHIEQLFNERNQS 740
Fly 741 SGEFIVEF-SDPASCKLAIREFHNRRFRGRGLRVVAITPQEIADRMKKPFMDYLPGGNGPRKAET 804
Fly 805 N---------NANDGAGGNKASAQPSRR--RGPSRFDKPQEQPSQQQDRPLSLEREDNSSTSSNA 858
Fly 859 PVKQHFNPFARPD---------PPLSSS----SLS---------------------PS------- 882
Fly 883 -----------------------------NQGQVKPTSPVPVPTSIIPDKFNRPGCVVAMRNVPF 918
Fly 919 KAELKDIMRFFSDYKLSPDDIIRRFNDEGKPTGDTRVAFESPSEARSAFESRRKKQIFNRTVYLD 983
Fly 984 I 984 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | 42/72 (58%) |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | 20/70 (29%) | ||
RRM | <364..551 | CDD:223796 | 49/197 (25%) | ||
RRM_SF | 478..549 | CDD:240668 | 19/71 (27%) | ||
RRM_SF | 702..773 | CDD:240668 | 16/71 (23%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | 25/71 (35%) | ||
rbm12 | NP_001003856.1 | RRM1_RBM12 | 1..92 | CDD:241189 | 51/90 (57%) |
RRM2_RBM12 | 301..375 | CDD:241191 | 21/83 (25%) | ||
RRM3_RBM12 | 415..515 | CDD:240956 | 26/144 (18%) | ||
RRM4_RBM12 | 535..622 | CDD:241193 | 26/162 (16%) | ||
RRM5_RBM12 | 799..874 | CDD:241195 | 26/75 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 198 | 1.000 | Inparanoid score | I3769 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D132643at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001433 | |
OrthoInspector | 1 | 1.000 | - | - | otm24736 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_112833 | |
Panther | 1 | 1.100 | - | - | O | PTHR13976 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X6068 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.060 |