Protein Alignment CG7879 and glo

DIOPT Version :9

• Sequence 1: NP_647626.1
• Gene: CG7879 / 38184
• FlyBaseID: FBgn0035235
• Length: 985
• Species: Drosophila melanogaster
• Sequence 2: NP_650120.1
• Gene: glo / 41431
• FlyBaseID: FBgn0259139
• Length: 586
• Species: Drosophila melanogaster
• Alignment Length: 609
• Identity: 125/609 - (20%)
• Similarity: 192/609 - (31%)
• Gaps: 187/609 - (30%)

  Fly   342 GGGSTPQVVADTCYIRMSGMCQNTSYSDIRKYFQGMYIPHN--GIKIM--MVNGSRTGVAYVEFS 402
            |||....|.....::|:.|:..:.::.:|..:.:.:.:.:.  ||.::  .|:|..||.||||.:
  Fly    37 GGGKIENVGESPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVA 101

  Fly   403 RVSSAQKAVQRNNTMFRDRLIQIVPVGDDEFEMAEERASRQGQDGSRSHGNHNGGDRGERGGGAP 467
            .....::|.:.|......|.|::......|.:.|..:.|        .||
  Fly   102 SQEDVEEARKLNKASMGHRYIEVFTATPKEAKEAMRKIS--------GHG--------------- 143

  Fly   468 VPVPRPVTNVLYIEDLPQTTTEQDIMKMFSASYTVVD---ILLSPSPKNRRESVAFVLFAREAEA 529
                  ...|:.:..||...|||.|.:.||......|   ||.....:.|....|||.|..:.:.
  Fly   144 ------TAFVVKLRGLPYAVTEQQIEEFFSGLDIKTDREGILFVMDRRGRATGEAFVQFESQDDT 202

  Fly   530 DSALQDTSKHYIGFRQLRVRSSSEEDMQNAKE--------------KQRRAN------------- 567
            :.|| ..::..||.|.:.:..||..:|:.|..              :.|.||
  Fly   203 EQAL-GRNREKIGHRYIEIFRSSIAEMKRATGAGGGVGGRPGPYDIRDRGANRGGNDFGGGRNDW 266

  Fly   568 ----------EQLLKEEADQREELLKDQQRRQKQQQQENENIQAN-------------------- 602
                      ..:|   .......|.:.......|...|.|...|
  Fly   267 GNNGNFGVGANNML---GFNNLPSLMNSGNFGNNQGGNNGNFGNNSGPSNFGNFGGGNNGGNSGN 328

  Fly   603 ------------RFAADPRRRQAEDQQQQQQMNMGPNFN-------------SNMSPNMMAPFVN 642
                        .|..:.......:.......|.|.|||             ||...|....|.|
  Fly   329 FGNDSGNSGNFGNFGNNGGGNFGGNNNGGGGFNSGNNFNSPGGVNNFGNNGGSNFGGNGGGGFNN 393

  Fly   643 GGNMPFHMPPLQQNGVNNF--------------------PFNMNNNY--NYNGNSNG------NG 679
            |||.      :..:||.||                    .|..|||.  |:.|.:||      ||
  Fly   394 GGNF------VSSSGVGNFGPIGGGRNNNNGNFGNSGFGNFGGNNNVGSNFGGGNNGGGGGFNNG 452

  Fly   680 PNYPNDN-----GGAGVIQRPRQEDV-FVRVH--NCEYATRANDLGELFSLEHLRIEHIEQLFNE 736
            .|:...|     |..|.|...|..|: :..:|  ...|.:..||:.:.|  |.:|..::...:|:
  Fly   453 SNFGGGNSMGGGGNFGPIGGGRGNDIEYYTIHMRGLPYTSFENDVFKFF--EPIRPANVRINYNK 515

  Fly   737 RNQSSGEFIVEFSDPASCKLAIREFHNRRFRGRGLRVVAITPQEIADRMKKPFMDYLPGG-NGPR 800
            :...||.....|......::|:     :|.|           :::..|..:.|.|....| ||
  Fly   516 KGLHSGTADAYFDTYEDSQVAM-----KRHR-----------EQMGSRYIELFYDGKTRGLNG-- 562

  Fly   801 KAETNNANDGAG-GNKASAQPSRR 823
             .|....|.|.| ||......|||
  Fly   563 -GEHGGGNGGGGMGNNGGGNFSRR 585

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7879	NP_647626.1	RRM1_RBM12_like	2..75	CDD:240954
		RRM_hnRNPH_ESRPs_RBM12_like	355..425	CDD:240700	17/73 (23%)
		RRM	<364..551	CDD:223796	42/193 (22%)
		RRM_SF	478..549	CDD:240668	21/73 (29%)
		RRM_SF	702..773	CDD:240668	14/72 (19%)
		RRM_hnRNPH_ESRPs_RBM12_like	910..982	CDD:240700
glo	NP_650120.1	RRM_SF	51..125	CDD:302621	17/73 (23%)
		RRM2_hnRNPH_like	146..224	CDD:240948	22/78 (28%)
		RRM3_hnRNPH_CRSF1_like	481..555	CDD:240950	16/91 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR13976
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010