Sequence 1: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_002083.4 | Gene: | GRSF1 / 2926 | HGNCID: | 4610 | Length: | 480 | Species: | Homo sapiens |
Alignment Length: | 491 | Identity: | 95/491 - (19%) |
---|---|---|---|
Similarity: | 172/491 - (35%) | Gaps: | 109/491 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 279 ALQQVSSGSAAPAQPSKSESEP-IAFASVNPYAQMYPQLFQQQQMLLQQQQTQAKVSPTMGGSPG 342
Fly 343 GGST------------------PQVVADTCYIRMSGMCQNTSYSDIRKYFQGMYIPH--NGIKIM 387
Fly 388 M-VNGSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVPVGDDEFEMAEERASRQGQDGSRSH 451
Fly 452 GNHNGGDRGERGGGAPVPVPRPVTN--VLYIEDLPQTTTEQDIMKMFSASYTVVDILLSPSPKNR 514
Fly 515 RES-VAFVLFAREAEADSALQDTSKH--YIGFRQLRVRSSSEEDMQN--AKEKQRRANEQLLKEE 574
Fly 575 ADQREELLKDQQRRQKQQQQENENIQANRFAADPRRRQAE-DQQQQQQMNMGPNFNSNMSPNMMA 638
Fly 639 PFVNGGNMPFHMPPLQQNGVNNF----PFNMNNNYNYNGNSNGNGPNYPNDNGGAGVIQRPRQED 699
Fly 700 VFVRVHNCEYATRANDLGELFSLEHLRIEHIEQLFN 735 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | 18/72 (25%) | ||
RRM | <364..551 | CDD:223796 | 42/194 (22%) | ||
RRM_SF | 478..549 | CDD:240668 | 23/73 (32%) | ||
RRM_SF | 702..773 | CDD:240668 | 7/34 (21%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | |||
GRSF1 | NP_002083.4 | RRM1_GRSF1 | 149..227 | CDD:241174 | 18/77 (23%) |
RRM2_GRSF1 | 249..322 | CDD:240949 | 24/76 (32%) | ||
RRM | 307..>459 | CDD:223796 | 32/189 (17%) | ||
RRM3_GRSF1 | 401..475 | CDD:241177 | 20/105 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |