Sequence 1: | NP_647626.1 | Gene: | CG7879 / 38184 | FlyBaseID: | FBgn0035235 | Length: | 985 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492671.1 | Gene: | rbm-12 / 172878 | WormBaseID: | WBGene00013703 | Length: | 948 | Species: | Caenorhabditis elegans |
Alignment Length: | 1181 | Identity: | 247/1181 - (20%) |
---|---|---|---|
Similarity: | 358/1181 - (30%) | Gaps: | 429/1181 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSVIIRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGEMGDAFIAFSTDEDARCAMLKDREKLM 65
Fly 66 EIQVRLLLSSRAEMQKVIETARKAASAQAPVSVPVPMPVVVPVT----------------AAKVA 114
Fly 115 GPAAPLPP--------IIGGLNTFLGQGQVKGVATGTVPSFLTYQQQAGITLSDVTG-------- 163
Fly 164 --------RRSRSRSSSSDDSDRERERDR---------------QRERERGRKRRSDRLDKSQER 205
Fly 206 EL-----KMVAGGGALPSPWA-----QPPQN-------------------QLPAVGLGLNMGLNL 241
Fly 242 NLPQIPSLQSYTTSTTTTNVTNNYNLEPSATSVQLLTALQQVSSGSAAPAQ--PSKSESEPIAFA 304
Fly 305 SVNPYAQMYPQLFQ--------QQQMLLQQQQTQAKVSPTMGGSPG--GGSTPQVVADTCYIRMS 359
Fly 360 GMCQNTSYSDIRKYFQGMYIPHNGIKIMMVNGSRTGVAYVEFSRVS------------------- 405
Fly 406 --SAQKAVQRNNTMFRDRLIQIVPVGDDEFEMAEERASRQGQDGSR-SHGNHNGGDRGERGGGAP 467
Fly 468 VPVPRPVTNVLYIEDLPQTTTEQDIMKMFSASYTVVDILLSP-----------------SPKNRR 515
Fly 516 ESVAFVLFAREAEADSALQDTSKHYIGFRQLRVRSSSEEDMQNAKEKQRRA-------------- 566
Fly 567 -------NEQLLKEEADQR------------------EELLK--DQQRRQKQQQQENENIQANRF 604
Fly 605 AADPRRRQAEDQQQQQQMNMGPNFNSNMSPNMMAPFVNGGNMPFHMPPLQQNGVNNFPFNMNNNY 669
Fly 670 NYNGNSNGNGPNYPNDNGGAGVIQR----PRQEDVFVRVHNCEYATRANDLGELFSLEHLRIEHI 730
Fly 731 EQLFNERNQSSGEFIVEFSDPASCKLAIREFHNRRFRGRGLRVVAITPQEIADRMKKPFMDYLPG 795
Fly 796 GNGPRKAE----TNNANDGA------------GGNKASAQPSRRRGPSRFDKPQEQPSQQQDRPL 844
Fly 845 SLEREDNSSTSSNAPVKQHFNPFARPDPPLSSSSLSPSNQGQVKPTSPVPVPTSIIPDKFNRPGC 909
Fly 910 VVAMRNVPFKAELKDIMRFFSDYKLSPDDIIRRFNDEGKPTGDTRVAFESPSEARSAFESRRKKQ 974
Fly 975 IFNRTVYLDII 985 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7879 | NP_647626.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | 44/72 (61%) |
RRM_hnRNPH_ESRPs_RBM12_like | 355..425 | CDD:240700 | 8/90 (9%) | ||
RRM | <364..551 | CDD:223796 | 31/225 (14%) | ||
RRM_SF | 478..549 | CDD:240668 | 12/87 (14%) | ||
RRM_SF | 702..773 | CDD:240668 | 9/70 (13%) | ||
RRM_hnRNPH_ESRPs_RBM12_like | 910..982 | CDD:240700 | 19/71 (27%) | ||
rbm-12 | NP_492671.1 | RRM1_RBM12_like | 2..75 | CDD:240954 | 44/72 (61%) |
RRM_hnRNPH_ESRPs_RBM12_like | 873..946 | CDD:240700 | 19/72 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4307 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001433 | |
OrthoInspector | 1 | 1.000 | - | - | oto20402 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13976 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R11245 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.030 |