Sequence 1: | NP_001261265.1 | Gene: | Pex10 / 38182 | FlyBaseID: | FBgn0035233 | Length: | 299 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001273501.1 | Gene: | RNF40 / 9810 | HGNCID: | 16867 | Length: | 1001 | Species: | Homo sapiens |
Alignment Length: | 276 | Identity: | 58/276 - (21%) |
---|---|---|---|
Similarity: | 100/276 - (36%) | Gaps: | 69/276 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 QKDARYTNELAEDLSDVLRLTGPRNWIKYNQMCRLLAELSYHGFASANNLQTLGEEYTGI-IQVD 81
Fly 82 GNYKQIPSRLLQLIAIVLEFGGD----SLFQRLMQKLDTYVANNDEIRTEIKPQLKKIIQRLRQ- 141
Fly 142 SPSYVK---ALHKSLFYLDASKYQLSKRTTGINYVLIRHWLQPEFSLYGYKILGVITFLQVSVSL 203
Fly 204 AISGWDAWREHKRQQLESIKQAGKNFLQRSSSTKDVDPNTPQCILCLEPRSDSSLTPCGHIFCWS 268
Fly 269 CLLEWLEERD-ECPLC 283 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pex10 | NP_001261265.1 | Pex2_Pex12 | 20..>173 | CDD:282595 | 35/161 (22%) |
zf-RING_2 | 244..284 | CDD:290367 | 15/41 (37%) | ||
RNF40 | NP_001273501.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..32 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 116..146 | ||||
SMC_N | 231..920 | CDD:330553 | 36/170 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 518..652 | ||||
RING-HC_RNF40 | 945..999 | CDD:319729 | 15/68 (22%) | ||
RING-HC finger (C3HC4-type) | 948..986 | CDD:319729 | 14/37 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R146 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |