DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex10 and Y38F1A.2

DIOPT Version :10

Sequence 1:NP_647624.1 Gene:Pex10 / 38182 FlyBaseID:FBgn0035233 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_496760.1 Gene:Y38F1A.2 / 174939 WormBaseID:WBGene00012606 Length:283 Species:Caenorhabditis elegans


Alignment Length:104 Identity:29/104 - (27%)
Similarity:57/104 - (54%) Gaps:16/104 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 QVSVSLAI-----SGWDAWREHKRQQLES--IKQAGKN--FLQRSSSTKDVDPNTPQCILCLEPR 253
            |:::::|:     :.:|||:..:||:..|  .:.|.:|  ..||..| :.:..::.:|.:||...
 Worm    49 QITMAIAVIFIVKAIFDAWQSRRRQRAASRMDENAERNQIITQRRIS-EALHQSSHECPICLANA 112

  Fly   254 SDSSLTPCGHIFCWSCLLEWLEERD------ECPLCRES 286
            |...||.||||||..|::::.::..      :|.:||.:
 Worm   113 SFPVLTDCGHIFCCECIIQYWQQSKAIVTPCDCAMCRST 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex10NP_647624.1 Pex2_Pex12 20..>173 CDD:398431
HRD1 <183..>287 CDD:227568 29/104 (28%)
RING-HC_PEX10 244..295 CDD:438190 16/49 (33%)
Y38F1A.2NP_496760.1 RING-HC_RNF170 102..159 CDD:438215 16/50 (32%)
DUF1232 <227..274 CDD:470158
Blue background indicates that the domain is not in the aligned region.

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